KEGG   Telopea speciosissima (New South Wales waratah): 122656481
Entry
122656481         CDS       T07910                                 
Name
(RefSeq) uncharacterized protein LOC122656481 isoform X1
  KO
K03873  elongin-B
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122656481
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tss04121]
    122656481
   03400 DNA repair and recombination proteins [BR:tss03400]
    122656481
Ubiquitin system [BR:tss04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     122656481
   Cul5 complex
     122656481
DNA repair and recombination proteins [BR:tss03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     122656481
SSDB
Motif
Pfam: ubiquitin Rad60-SLD UBL_UBAC1 Dsc3_N Ubiquitin_2 Chal_sti_synt_N
Other DBs
NCBI-GeneID: 122656481
NCBI-ProteinID: XP_043706952
LinkDB
Position
3:24323587..24343906
AA seq 105 aa
MAMYIRIKREKTTYFLQCDPTETILDIKQKLQTLIDQPVNDQRLILVTTNEVLDDSKTLA
DQKVENDAVVALTLKKDDDDEFEDVNIVRPDDFYQSREAEGGSNW
NT seq 318 nt   +upstreamnt  +downstreamnt
atggctatgtatatccgtattaagcgtgagaagacaacctactttctgcagtgcgatcca
actgaaacaattctagacattaagcagaaattgcagacacttattgatcaaccggtgaat
gatcaacgtttaatcctggtgacaacaaatgaagtattggatgactcaaagacattggca
gatcagaaggttgaaaatgatgctgtagtggcccttaccttgaaaaaagatgatgatgat
gagtttgaggatgtcaacattgtaaggccagatgatttctaccaatcccgtgaggctgaa
ggtggttcaaattggtaa

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