Telopea speciosissima (New South Wales waratah): 122657297
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Entry
122657297 CDS
T07910
Name
(RefSeq) autophagy-related protein 18b isoform X1
KO
K17908
autophagy-related protein 18
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122657297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122657297
03029 Mitochondrial biogenesis [BR:
tss03029
]
122657297
Membrane trafficking [BR:
tss04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
122657297
Mitochondrial biogenesis [BR:
tss03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122657297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_Vps41
WD40_CDC20-Fz
WD40
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
122657297
NCBI-ProteinID:
XP_043707884
LinkDB
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Position
4:26656501..26675160
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AA seq
393 aa
AA seq
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MANQSSSSASVILCASFNQDNSCFAIGTRDGFRIFDSNTGRVFYERAIGAFSIVEMLYSS
SLLAIVGAGQQPSLSPRRLCLFNTMTGTALRELNFLTSILAVRVNRKRLVVVLQEKTYIY
DLNSLAILDTVDTVPNAKGLCAFSPSLDGCYLALPASTTKGSVLVYNVMELHSHCEIDAH
RSPLAAIVLSSNGMYIATASEQGTLIRVHLVSQATKSYSFRRGTYPSTIYSLSFGPSTEL
PDILIATSSSGSIHVFFLGFILDQRSKRSSSLLGSMIPNSINDAFEPGYHHVLHNANSAG
VKSYATIRSIDKVASTSISQVATSNYATIRSIDKVASTSMSQVATSKACISIITSNGYFQ
EYSLSFDHLNEPLWSLEREFNLLTVVPDNVNNS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccagtcatcttcttcagcatctgtaattctctgtgcttctttcaatcaagat
aacagttgctttgccattggaactagggatggattcaggatattcgactctaatactggg
agagttttttatgaaagagcaattggagcttttagcatcgttgaaatgctgtatagttca
agccttcttgccatagtaggagcggggcagcagccatcattgtccccacgtcggctctgc
ttgttcaatactatgactggcactgcacttagagagctaaatttcttgacgtcgattctt
gctgttcgtgtaaatcggaagaggcttgttgtggtgttgcaagaaaagacatacatatat
gatttgaacagtcttgccatcctggacacagttgatactgtgccaaatgcaaaagggctt
tgtgcattttctcctagtttggatggttgctatttggctcttccagcaagtacgacaaaa
ggatctgtgttggtatataatgtgatggaactccattcgcattgtgagatagatgcccat
cgttcaccattggcagcgattgtactttcttccaatgggatgtacatagcaacggcttct
gaacagggaaccttaatcagagttcatctggtttcacaggcaaccaagtcatatagtttt
cgaagagggacatacccgtcgactatatattccttgtcgtttggaccatctacggaactt
ccagatattcttattgctacaagctcttcgggttctattcatgtgttttttcttggattt
atcctagatcagaggagcaaaagatcaagtagtcttcttggttcaatgattccaaactcg
ataaatgatgcctttgaaccgggttatcaccatgtacttcacaatgcaaactcagcagga
gtcaaaagctatgccacgattcgcagtatagacaaagttgccagcacatctatatcccaa
gttgctacctctaactatgccacgattcgcagtatagacaaagttgccagcacatctatg
tcccaagttgctacctctaaagcttgcatttcaataatcacatccaacggatactttcag
gagtacagcttaagttttgaccatctaaatgaacctttgtggagtttggagcgtgaattc
aatctattaacagtagttccagataatgtcaataactcatga
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