KEGG   Telopea speciosissima (New South Wales waratah): 122657403
Entry
122657403         CDS       T07910                                 
Name
(RefSeq) WD repeat-containing protein 48-like
  KO
K15361  WD repeat-containing protein 48
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    122657403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tss03400]
    122657403
DNA repair and recombination proteins [BR:tss03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     122657403
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_WDR75_2nd WD40_RFWD3 RAWUL Beta-prop_IP5PC_F Beta-prop_IFT140_1st WDR90_beta-prop_4th Mcl1_mid
Other DBs
NCBI-GeneID: 122657403
NCBI-ProteinID: XP_043708035
LinkDB
Position
4:complement(63709541..63773572)
AA seq 766 aa
MHRVGSAGNTSNSSRPRKEKRLTYVLNDADDKKHCAGINCLALLRTSVPDGCDYLFTGSR
DGTLKRWALAEDAATCSATFESHVDWVNDAVLAGDNILVSCSSDTTLKTWNCSSDGTCTR
TLRQHSDYVTCLASAQKNSNIVASGGLGGEVFIWDLEAALVPASMSTDAKEDDCSNDIIG
SANSGLPITSLRSIGSNSSISLHQTQPHGYGPIAAKGHKESVYALAMNDDGSLLVSGGTE
KVVRVWDPRTGSKAMKLRGHTDNIRALLLDPSGRFCLSGSSDSMIRLWDLGQQRCVHSYA
VHTDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESVLLCTKEHPVLQLALHDDGIWVA
TTDSSVHRWPSDGRNPQKAFQRGGSFLAGNLSFSRARACLEGSTPVPVYKEPSFTIPGTP
GIVQHEILNNRRHVLTKDTAGSVKLWEITRGIVVEDYGKVSFEEKKEELFEMVSIPAWFT
TDTRLGSLSIHLDTPQCFSAEMYSADLTIPGKPEDDKVNLARETLKGLLAHWLTKRRQRA
TSQASANGDGSSGKDFSARNHSHSRVEVDGNAENDSMVYPPFEFSTVSPPSIITEGSHGG
PWRKQITELDGTQDEKDFPWWCLDCTLNSRLPPKENTKCSFYLQPCEGATVQIVTQGKLS
APRILRMHKVINYVIEKIVLDKPLDGGNSDGTFAPVLGVGHSQLSTVGGEGSFRPSLKPW
QKLKPSIEILCNNQVLSPDMSLATVRAYIWKKPDDLVLNYRLLQGK
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgcaccgtgtaggtagtgcggggaacacatccaactcatcccgcccaaggaaggaaaag
aggttgacatatgtgctcaacgatgctgatgacaaaaagcattgtgccgggataaattgc
ttggcactattaaggacatcagtgcctgatggttgtgactatctgttcactggaagccga
gatggaacactgaagagatgggcactggctgaagatgctgctacctgctctgctacattt
gaatctcatgttgattgggtcaatgatgcagtccttgcaggtgataacatccttgtgtca
tgctcttcggacaccacccttaagacgtggaattgctcgtctgatgggacttgtactaga
actctccggcaacactctgactatgttacttgtcttgcttctgcccagaaaaatagcaat
attgttgcttctggtggccttggtggagaggttttcatatgggaccttgaagctgcactt
gttccagcctcaatgtccactgatgcaaaggaagatgactgttcaaatgatataattggt
tctgcgaattctgggctgcctattacaagtttacgttctattggttcaaacagcagtatt
tcactccaccagactcagccacatggatatggtcctattgctgctaagggtcataaagag
tctgtttatgcattggcaatgaatgatgatggaagcttactggtttctggtggtactgag
aaggttgtccgtgtttgggatcctagaactggttcaaaggctatgaagctaagggggcac
acagataacataagggctctgcttctggatcctagtgggagattttgcttatcaggatcc
tctgattctatgatcagactatgggatcttggtcagcagcgttgtgtacattcctatgct
gtgcatacagattctgtttgggcacttgccagcaccccaacattcagccatgtttatagt
ggtgggagggacctttctttatatctcacagacttggctacaagagaaagtgtgctgctt
tgcacaaaagaacaccctgttttgcaacttgcactgcatgatgatggcatatgggtcgca
acaacagattcttctgtacataggtggccctctgatggacgtaacccgcagaaggctttt
cagagaggtggttcatttttggctggcaatttgtccttttccagggcaagagcttgttta
gaaggatctactcccgtgcctgtttacaaagaaccatcatttacaattcctggaactcca
ggaattgttcaacatgaaattctaaacaacagaaggcatgtcctgacaaaggatacagca
ggctcagtgaaattatgggagatcaccagaggaattgtggttgaggattatggcaaggtt
tcatttgaagagaagaaggaagaactatttgagatggtcagtattcctgcatggttcact
acagatactaggcttggaagcttgtctatccatttggacacaccacaatgcttttctgca
gaaatgtattctgctgacctgactatacctgggaaacctgaggatgacaaggtcaatcta
gcacgggagacgcttaaaggtttattggctcattggttgaccaaaagaaggcaaagagca
acatcccaagcttcagccaatggtgatggttcatcagggaaggatttttctgctagaaat
cattcccattcaagagttgaggttgatggtaatgcagaaaatgactcgatggtttaccct
ccgtttgagttttctacggtttctcctccttctataattactgagggctctcatggaggt
ccatggagaaagcagatcactgagttggatggtactcaagatgagaaggattttccatgg
tggtgtcttgattgtactttaaatagtcgattgccgccaaaagaaaataccaagtgcagc
ttttatctacaaccttgtgaaggagcaactgtccaaattgtcacacaggggaaactgagt
gcacctcggatattgcgaatgcataaagttataaactatgtcatagaaaaaatagttctt
gacaaaccattggatggtgggaattccgatggaacatttgctccagtattgggtgttgga
cattcgcaactgtcaacagttgggggagaaggctccttccggcctagcttgaagccctgg
cagaagctaaaaccttcaatagagatattgtgcaataatcaggtcttatctccagacatg
agcttagccacagttcgagcttatatatggaagaaacctgatgatttggtccttaattac
agacttttgcaaggaaaatga

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