Telopea speciosissima (New South Wales waratah): 122657529
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Entry
122657529 CDS
T07910
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
122657529
Enzymes [BR:
tss01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
122657529
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
122657529
NCBI-ProteinID:
XP_043708193
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Position
4:4342487..4350081
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AA seq
709 aa
AA seq
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MQKKKEGKVSGSRICKVIHMKKVSWRQNFFLCLGLLVQLFLLVDCTKKSELRRSIPKSSN
GEEPPSSSQLRLLIQDRYVVMDNGLLQVTLSNPQGSVTNISYNGTNNLLEYRNEEDNRGY
WDLVWNPANSSGKGTFNKILGTSFKVIMEDENQIELSFTTTWDYSVGDKSVPLNIDKRFV
MLQASSGFYSYAIYKHLEGWPDFNMEETRIAFKLRKDWFHYMAISDHRQRIMPMPEDRAT
GQPLAYPEAVILTNPTNPELKGEVDDKYQYSCENQESRVHGWISFDPPIGFWMINPSDEF
RTGGPVKQDLTSHVGPTTLSMFISLHYAGEDLSMKVRDREHWKKVFGPVYIYLNSAFDDE
HVLSLWDDAKNQMLTEVQNWPYSFPASDDFLSYDQRGIVTGQLFIRDRFVEEEDIPADSA
YLGLAPPGDAGSWQTEHKGYQFWTRADSDGSFLINDVRPGDYNLYGWMPGFIGDYKYDVN
ITINPGSNLSLGHIIYEPPRHGPTLWEIGIPDRSAAEFYVPDPKPEYINRLYLSNPTSND
KVAAPVDKFRQYGLWERYAELYPLQDLVYTVGLSDYSKDWFFAHFNRNIGNNTFQSTTWR
IIFQLDNMDRNLNKTYMLQLALASASNCELQVRFNIPDVDPPHFTTKLIGRDNAIARHGI
HGLYWLYNIEIQSDWLVIGENVIFLTQSRHLSPFQGVMYDYIRLEGPSS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagaagaaagaaggaaaagtaagtggaagccgcatttgcaaggttatccacatg
aagaaggtgtcttggaggcaaaacttcttcctttgtttgggattgcttgttcaactgttc
ctgctggttgattgtactaaaaaatcagaactgagaaggtccattcctaaaagcagcaat
ggcgaagaacctccgtcgtcttctcagctgcgattattgatacaagatcgatatgtagtg
atggacaatggtctcctccaagtgaccttatctaacccacaaggaagtgttactaacata
agctacaatggcactaataatttactggagtatcgcaacgaagaagataatagaggctat
tgggatcttgtgtggaatccggctaactcttctggcaaaggaaccttcaataagatactg
gggacaagtttcaaagttataatggaagatgaaaatcaaattgagctttcattcacaaca
acttgggattactctgttggagacaaatctgttcccttaaatatagacaaaaggtttgtg
atgctgcaagctagctctggtttctactcatatgcgatttacaagcatctagaaggatgg
cccgattttaacatggaagaaaccagaattgctttcaaactcaggaaagactggtttcac
tacatggccatatcggaccacaggcaacggatcatgcccatgccggaagacagggcgacc
ggtcaacccttagcttacccggaagcggttatcttgaccaatccaaccaatcccgaactc
aagggagaggtggatgacaagtaccagtattcatgtgaaaatcaagagagtagggtccat
ggttggatcagcttcgaccctcccattggattctggatgatcaatcccagcgacgagttc
cgtacaggtgggcctgttaagcaggaccttacctcccatgtgggccctacaactctctcg
atgtttattagtcttcactacgctggggaggatctatcaatgaaggtacgagatcgagag
cattggaaaaaggtttttggccctgtttacatttatctaaactcagcctttgatgacgag
catgtcctttcactttgggatgatgcaaaaaatcagatgttgacagaagtacaaaactgg
ccatacagtttcccagcttctgatgacttcctttcttacgatcaacgcggtattgttact
ggtcaattatttatccgagacaggttcgttgaagaagaagatatccctgccgactctgct
tacttggggttggctccacctggagatgctggatcttggcaaacagaacacaagggttac
cagttttggactagagctgattctgatggatctttcttaataaatgatgttcggcctgga
gattataatctttacggatggatgcctggttttataggagattacaaatatgatgttaat
attaccatcaacccaggatccaacttaagtctgggtcatatcatatatgaaccaccaaga
catggtccaaccttgtgggagataggaattcctgatcgttctgcggccgaattttatgtg
cctgaccctaaaccagaatatataaatagactttacctcagtaatccaaccagcaatgat
aaagttgcagcacctgttgataaatttaggcaatatggactgtgggaaaggtatgcagaa
ttgtatcctcttcaagacctcgtgtatactgtgggtctgagtgactacagcaaggactgg
ttcttcgcacattttaacaggaacattggtaacaacacgttccaatcaaccacatggagg
attatattccagcttgacaacatggacagaaacctaaacaaaacttatatgttgcagtta
gcactcgcttcagcttcaaattgtgaactgcaggttcggttcaacattcctgatgtggat
cccccacacttcacaactaagctgatagggagagacaatgcaatcgcaagacatggaatc
catggactatattggctttacaacattgagatacagagtgattggcttgtcattggagaa
aatgtaatcttcttgactcaatcaagacatttaagcccttttcaaggagtcatgtatgat
tatatacgattggaagggccctctagctag
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