Telopea speciosissima (New South Wales waratah): 122657708
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Entry
122657708 CDS
T07910
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122657708
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tss01009
]
122657708
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tss03041
]
122657708
Protein phosphatases and associated proteins [BR:
tss01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122657708
Spliceosome [BR:
tss03041
]
Common components
Common spliceosomal components
SR proteins
122657708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
CoV_nucleocap
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
122657708
NCBI-ProteinID:
XP_043708434
LinkDB
All DBs
Position
4:complement(9594309..9610159)
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AA seq
213 aa
AA seq
DB search
MADSPRRRSRSRSRSRPRSPSRSRSRSGSRGREDATNPGNTLYVTGLSTRVTDRDLEDHF
SREGKVLSCRLVVEPRTRISRGFAFVTMDSLEDAERCITHLNQSVLEGRYITVEKSRRKR
PRTPTPGNYLGMKSSRESSYRGGDRGRYRGGYGRDDYGYRRSPRHSPYRGGHDYSPRRSP
YGGRSRRERSRSPPYSSYSPDRGYGRRPNAYAR
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcacctcgtagaagatccaggtccaggtccagatcaaggcccagatcccca
tcgcgctcgaggtcaaggtctggaagtcgtggcagggaagatgctacaaatccaggaaat
acactctatgttactggtctgtctacaagggtcactgatagggaccttgaagatcatttc
tctagggaaggaaaggtactttcttgtcgactggttgtggagcctcggacacgcatctct
cgtggttttgcttttgtgactatggactcattggaggatgctgaacgttgcataacgcat
ctcaatcagtcagttctggaaggccgctacataactgtggagaagtcaaggaggaaacgg
ccaaggacacctacacctggaaactatcttggaatgaaaagctccagggagtcaagctat
cgtggtggtgatcgtggtcgataccgtggtggctatggccgtgatgattatgggtaccgg
aggtctccgaggcactcaccttatcgaggtggccatgattattcacccaggcgctcacct
tatggtggtaggtcaagaagagaacggtctaggtcgcccccttattcatcatatagccca
gataggggatatgggcgtaggcctaatgcctatgcaagatag
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