Telopea speciosissima (New South Wales waratah): 122658462
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Entry
122658462 CDS
T07910
Name
(RefSeq) uncharacterized protein LOC122658462 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tss01002
]
122658462
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122658462
Enzymes [BR:
tss01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122658462
Peptidases and inhibitors [BR:
tss01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122658462
Ubiquitin system [BR:
tss04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122658462
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
122658462
NCBI-ProteinID:
XP_043709373
LinkDB
All DBs
Position
4:complement(29651700..29677337)
Genome browser
AA seq
1139 aa
AA seq
DB search
MHVAGLSLDLYWCLQFVFTAFLLALGLLHLVKNTASKYFVVDANFDEGSGASVEGHRRTG
RDEMLAVAGDGDGCAVCGNSANKKCARCKLVRYCSQTCQAEHWKSIHKSECKVVKSSGII
SLIPSVSDARRRAVFVDISPSDPGHGNCMVQRSKKILFPYDEFVKLFNWDKPGFPPCGLI
NCGNSCFANVVLQCLSCTRPLVAYLLEKGHRRECRRNDWCFLCELQTHVERASHNLHPFS
PINILSRLPNIGGNLGYGKQEDAHEFMRFAIDTMQSVCLDEFGGERALHPSSQETTLIQH
IFGGHLQSQVICTKCNKISNRYENMMDLTVEIQGDAASLENCLDQFTVKEWLDGENMYKC
DGCNDYVKAWKRLTVRQAPNILTIALKRFQSGRFGKLNKKVTFPEALDLGPYMSESVDGT
NLYRLYAVVVHVDMLNASFFGHYICYTKDFQGNWYRIDDCKVITVELEEVLAQGAYMLLY
SRNCVRPPCSNSMESSAEQGQMVAEAQESGPCSQAPVEPLNIVDTQSSDVSHSNESIPEE
ELSVQVGEDSKSTSGGPQDMHVDDPRCSSSGSKDIECHSKEGYHAGVASVELELKELPDL
PLSSDTLSDMVQSKECESSSSYSVHETCFEDGSGATTNYANDLSLESSTKNSLSSQNIVY
EMAETSLEVCTAASSLVGEKSDGANHAGSETLPSPSLESVVAVKPMECSPAAQTADSKVS
RLSGVKSSCKGNLKPLFSPGFLNKSTTSRSLKRPAKTDIEHTDCFSMKDERNCNRVAKPA
FPGRSIDEVCQHMEFSLDGGSALTMCSVQKQSGNCLDDDEKLNKEACGAFDPRNDNGCNG
GAVSTLSDKNNRNNHNCDSRREKVCETGSGQLVNHCLPVQRLESNSSSKEKLKPLPSSGF
LDSHRRGEMLGPDGEARKQPGEVGAPCMVDVICNGIAEHALDHQNISEANGHGQLVSDSN
GTSVSCFIGQAKQLVNKDKMVRKEFAEVGYSGNNCSRDSVLSDENGECINNIGSGQVPFC
GTSRSQLVDCRTPFHSTSYNNMPLGKNYSNKNEESRELNETIHHHEVETDCQRLSDGRPV
TSCEMAKPLKKQPLNMTYISPKEPWSVRQPLEPSCDCKGYFNATLTDEGGQDFKRQRHV
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcgctggtctttcgctggatctctattggtgccttcaattcgttttcactgcg
tttcttttagcacttggattacttcacctggtaaagaacacggcttcgaagtatttcgtc
gtcgacgctaattttgacgaaggaagtggtgcgtctgttgagggtcatcgccggactggt
cgcgacgagatgcttgccgttgccggtgacggcgatggctgcgctgtttgtggcaattcg
gcgaataagaagtgtgcgcgttgcaaacttgttcgatattgctcccaaacatgccaagca
gaacattggaaatcaattcacaaatcagaatgcaaggtagtcaaatcatctggcattata
tctttgataccatctgtcagtgatgccagaaggagagcagtctttgtggatatatctcca
tcagatcctggtcatggaaattgtatggttcagcggtcaaagaagattcttttcccttat
gatgaatttgtgaagcttttcaactgggacaagccaggatttccaccttgtggccttata
aattgtggaaacagctgctttgcgaatgtggttctgcaatgtctttcatgcacgcggcca
ctggttgcctacttgttggagaaaggtcaccggagagaatgcaggcggaatgattggtgc
ttcttatgtgaacttcaaacccatgttgaaagagctagtcacaatttgcatcccttttca
cctatcaatattctctctcggttacctaatattggtggtaatcttggctatggaaaacaa
gaggatgctcacgagttcatgaggttcgcaattgacacaatgcaatcagtttgccttgat
gaatttgggggagaaagagccctccatccgagctcccaggagacaacccttattcaacat
atatttggtggtcacctccaatctcaggtgatttgtacaaaatgcaataagatatcaaat
cgatatgaaaatatgatggatttgaccgttgagattcaaggagatgcagcatctttggag
aattgcctagaccagttcactgttaaagagtggcttgacggtgaaaatatgtataaatgt
gatggatgcaatgactatgtcaaggcatggaagcgtcttacagttcgccaggctccaaat
attcttaccattgctcttaaaagatttcagagcggaaggtttgggaaactaaacaagaaa
gtgacttttccagaggctttagatcttggcccatacatgagtgaatcggtagatggcacc
aatttgtataggctgtatgctgttgttgtgcatgtggacatgctgaatgcatcttttttt
ggacattatatttgttatacaaaggatttccagggaaactggtacaggattgatgactgt
aaggtcatcactgttgaattggaggaggtacttgctcagggagcttatatgctattatat
agtaggaactgtgtgcggcctccttgttccaattccatggaatcttcagcggagcaggga
caaatggtggcagaggcccaagaatcagggccgtgttcacaagcaccagttgaacccttg
aacattgtggatacacaatcttctgatgtttcacactcaaatgaatctataccagaggaa
gagttgtctgtgcaagttggtgaagattcaaagtccactagtggtggtccacaggatatg
cacgttgatgatcctcgttgctcttcctctggttcaaaggatattgaatgccatagcaaa
gaaggttatcatgcaggagttgcgtctgtcgaactcgagcttaaagaacttcctgatttg
ccgctttctagtgacacactttctgatatggttcaaagtaaagaatgtgaatcatccagc
tcttattctgttcatgaaacctgttttgaggatggaagtggagcaacgactaattatgca
aatgacttgtctttggagtcttcaactaaaaattccctgtccagtcagaatattgtctat
gaaatggcggagacatctcttgaggtttgtactgctgcttcaagcttggttggagaaaag
tcagatggagcaaatcatgctggttctgaaactttgccaagccctagtttggagtcggtg
gtagctgttaagccaatggagtgttcccctgcagctcagactgctgatagcaaagtttca
agattgtctggagtgaaatcctcctgcaagggaaatttgaagccactgttctctccaggt
tttcttaacaaaagcactacaagtagatctctgaaaagaccagcaaaaactgatatagaa
catactgattgtttttccatgaaggatgagaggaactgcaacagagtcgcaaaacctgct
tttcctggtcggagcattgatgaagtttgtcaacatatggaattttccttggatggtggt
agtgcattaacaatgtgttctgttcagaaacagtctgggaattgtctagatgatgatgag
aagttaaataaagaagcatgtggggcttttgatccccgtaatgataatggatgcaatgga
ggtgcagtatctactctgtctgataaaaacaacagaaacaatcataattgtgacagtcga
cgagagaaagtctgtgagactggcagtggtcagcttgtgaatcactgtttgcctgttcag
cggctagaaagcaactctagttccaaagagaagttgaagccactgccttcatctggtttt
cttgatagtcacaggaggggagaaatgctgggcccagatggggaagctcgaaaacaacct
ggtgaagttggtgctccctgcatggttgacgtgatatgcaatggtattgctgaacatgct
cttgatcatcaaaatatttcggaggctaatggtcatggtcaacttgtttcagattctaat
ggtacctcagtatcttgttttattggccaagccaagcagcttgtgaataaggataagatg
gtcagaaaagaatttgctgaagttggttactccgggaacaactgcagcagagattctgtt
ctttctgatgagaatggtgaatgcattaataacattggttctggacaggtgccattctgt
ggtactagcaggagtcaacttgtagattgcaggactccatttcattctacttcttataat
aacatgccattaggaaagaattactcaaacaagaatgaggaaagccgggaacttaatgaa
accatccatcaccacgaggttgaaacagactgccaaagattgtctgatgggagaccggta
acctcctgtgaaatggcaaagccactaaagaagcaacctctgaacatgacctacatttcc
cccaaagaaccatggtcagtacgacagcctttggagccaagttgtgattgcaaaggatac
ttcaatgccactcttacagatgaaggtggacaagattttaagaggcaaagacatgtgtga
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