Telopea speciosissima (New South Wales waratah): 122658571
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Entry
122658571 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6-like isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122658571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122658571
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122658571
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
HECT type E3
122658571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
122658571
NCBI-ProteinID:
XP_043709518
LinkDB
All DBs
Position
4:65601831..65697399
Genome browser
AA seq
1060 aa
AA seq
DB search
MFFSGDSSTRKRVDLGGRSSKERDRQRLLEQARNERKRRLNLRQQNSAALKIQKCFRGRK
AVEAERSKVREQFCLTFGKHCQKVDRNCFYSDSGFLQQLLFFFNAHNSGDFVALVETCRL
LHRFVRANAGDVVDLFAGVDYKSKHAIVENRVKRLAFACLQAVHHNRNQLKDQLLLSSEC
TSVPAVILLEAVVILTDPKLPWVCKVVGYLLQRNTFALLRDIIVTAKQSTMDRAANRELS
SLGHVLILIASHVGQQPFTSTNIDPRWSFSIIASHVGQQPCTCTNIDPRWSFSSQVLTIP
FLWQLFPHLKEVFAVSGMNKHYIHQMALCVHGQANVLPDDISREFPGYACLLGNILETAV
AAFSQPNSSFDMAIDFAVVSAFMLEALPPIKSSNRECKGDSSLGVDEMVIDEECVEEGMN
KDLQRQIINAIDPRLLQQLVNVLSRGTSLLSGSPKDMPQNKEVEAVGAICSFLHVTFNTL
PLELIMTVLAYRTELVPMIWNFMKLCHENQQWPSLSSQTAHLLGDGPGWLLPLAVFCPVY
KHMLMIVDNEEFYEQEKPLSLKDIRGLIVILKQALWQLLWVIPMKSPNAVKSSTVLSGHR
RNSVDFIQQRVSIVTSELLAQLQDWNNRQQFTSPSDFHAQEAVDEVFISQALTENSRAYD
ILKQAPFLVPFTSRVRIFTSQLAAARQRNGPQAVFTRHRFRIRRDRIFEDAFNQLSALSE
EDLRGMIRVSFVNELGVEEAGIDGGGIFKDFMENITRAAFDVQYGLFKETTDHLLFPNPG
SGLIHEQHLQFFHFLGSILGKAMFEGILVDIPFATFFLSKLKQKYNYLNDLTSLDPELYR
HLIFLKHYEGDISELELYFVIVNNEYGEQTEEELLPGGKDIRVTNENVIQFIHLIANHRL
NFQIRQQSSHFLRGFQQLIQKNWIEMFSEHEIQLLISGSLEGLDVEDLRHHTNYAGGYHN
EHYVIEMFWEVLKNFSSENQQKFLKFVTGCSRGPLLGFKYLEPLLCIQRAAGDASDEALD
RLPTSATCMNLLKLPPYRSKEQLEMKLMYAINAEAGFDLS
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgttcttctccggagattcatcgacgcggaagagggtagatttaggcggaaggagttcg
aaggaaagagacagacagaggcttttagagcaggcacggaacgaaaggaaacgccgttta
aatttacggcagcagaattctgctgctcttaagattcagaaatgcttcagagggaggaag
gctgtggaggctgagcgttctaaagtgcgagagcagttctgcctaacttttgggaagcac
tgccaaaaggtagacaggaattgtttctattctgattcagggttccttcagcagttgctc
tttttcttcaacgcacataacagtggggattttgtggcccttgtggagacgtgtcgattg
ctccatcgatttgttcgagccaatgcaggggatgttgtggacctctttgcaggcgtggac
tataaatcaaagcatgctattgtagagaacagagtgaagcgacttgcatttgcttgtctt
caggctgttcatcataataggaatcagctgaaggatcaacttttgctgtcttctgagtgc
accagtgtaccggctgtcatcttgctcgaggcagtggttatcttgacagatcccaaactt
ccatgggtttgcaaagtggttggttatctgttacaaagaaatacatttgcattattgaga
gatattattgtcactgcaaagcaaagtacaatggatcgagccgctaatagagagctttct
tcattggggcatgttcttatcctcatcgcttctcacgttggtcagcagccttttactagt
acaaatatagatccaagatggagtttttccattattgcttctcatgttggtcagcagcct
tgtacttgcacaaatatagatcccagatggagtttttcctcccaagttcttacgattcct
ttcttgtggcagctttttccacacttaaaagaggtgtttgcagttagtgggatgaacaaa
cattatattcatcagatggcattgtgtgtgcatggtcaagccaatgttcttcctgatgat
atatcacgtgaatttcctgggtatgcctgccttcttggaaatatattggagactgctgtg
gctgctttttctcaaccaaacagctcctttgatatggcgatagactttgcagtggtttct
gcatttatgttggaggcactgcccccaattaaatcttcaaatagagaatgtaagggagat
tcatctttgggcgttgatgaaatggttattgatgaggaatgcgtagaagagggtatgaac
aaggatttgcaacgccagattattaatgcaatagatccacgcctccttcagcaattggtt
aatgtattatccagaggtacctcacttctaagtggatctcctaaagatatgccacaaaat
aaggaggtggaagctgttggggccatttgttctttcttgcatgttacgttcaatacttta
cctctggagctgattatgactgtattagcatacagaaccgagcttgttcctatgatttgg
aacttcatgaagttgtgccatgagaatcaacaatggccatctttgtctagccagacagca
catctattgggagatggccctggttggcttttacctttagctgttttctgtcctgtgtat
aagcatatgctcatgatagttgataatgaggaattctacgaacaggagaaaccactctct
ttaaaagacatcagaggcttgattgttatcttgaaacaggctttgtggcagctcctatgg
gtaattcctatgaagtctcctaatgcagtgaaatcttccaccgtcctttcaggccacagg
aggaactctgttgatttcattcagcagagggtcagcattgttacttctgagctcctagca
cagttacaagattggaataatagacagcagtttacatctccaagtgacttccacgctcag
gaagcagtggatgaggttttcatttctcaggctcttactgaaaattcaagagcgtatgac
atattgaaacaagctcctttcttggtgccatttacaagcagggttagaatattcacttca
cagttagcggctgcaaggcaaagaaatggtcctcaagctgtttttacccgacatagattc
agaataagacgggatcggatttttgaagatgcttttaatcagttgagtgcattgtctgag
gaggatcttcggggaatgatccgggtatcattcgtcaatgaacttggagttgaagaggcc
ggaattgatgggggtgggattttcaaagatttcatggagaatatcactcgagcagctttt
gatgtgcaatatgggttatttaaggaaacaactgaccaccttttattccctaatcctggc
tccggattgatacacgaacaacatctccaatttttccattttcttggtagcatactggga
aaggccatgtttgaagggattcttgttgatattccatttgcgacattcttcttgagcaaa
ctaaaacaaaagtacaactatttgaatgacttgacttcgttagatccggaactataccgt
cacctcattttcttaaagcattatgaaggtgacatttcagaactcgaactgtactttgtc
attgtaaacaatgagtatggagagcaaacagaagaggagctgcttccaggaggaaaggat
atacgtgttacaaatgagaatgttattcaatttattcatcttattgccaaccataggttg
aattttcagattcgtcagcaaagttcacatttcctgaggggatttcagcagcttatacag
aaaaattggatagaaatgttcagtgagcatgaaatacagcttctgatatcaggttcactt
gagggcttggatgttgaagacctacgtcaccatactaattatgcaggtggctatcataat
gagcattatgtcatcgagatgttctgggaggttctcaagaatttttcttcagagaatcag
cagaaatttttgaagtttgtgacgggatgctctcgaggaccattgcttgggttcaagtac
ctggagcctctattgtgtatacagagggctgctggtgatgcctctgatgaagctcttgac
cgcttaccaacatctgcaacttgcatgaatcttctaaagcttcctccctatagaagtaaa
gaacaactagaaatgaaactgatgtatgcaatcaatgctgaggcgggttttgacttgagt
tga
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integrated database retrieval system
