Telopea speciosissima (New South Wales waratah): 122658628
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Entry
122658628 CDS
T07910
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tss01002
]
122658628
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122658628
Enzymes [BR:
tss01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122658628
Peptidases and inhibitors [BR:
tss01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122658628
Ubiquitin system [BR:
tss04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122658628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
122658628
NCBI-ProteinID:
XP_043709595
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All DBs
Position
4:complement(20975719..20991803)
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AA seq
1124 aa
AA seq
DB search
MLVRGDLRFSDLILVFFFFFVFPVLGLGFFVRRKWRLAVARREDIMRRAVLASEEAVRAE
LEAAAEFGVAVSVSVARPFQCAVCYCPTTTRCSRCKAVRYCSGECQIIHWRQGHKDGCHP
PITPSNFNDGGSDSGQKAIFGKQCEFSDDNLEIEGRHIKRTESSIEEPAPSEFSCSSEVQ
HRRDDKIEPLIDAKATDSKSESSIGSSLAGFSTSTGTYATVVDVFDCELPILSTSDGSEG
HQPKADKLENIPDVKDMEPIILLPSDFPSSVNSVNSSFSNKLKQKKSSVAAGEDYCNSAI
YSDSSSICSLDSSSNGRLTAESTASTDIWGAALDSSKSAHSSVSEDADDILCNSRSFLSS
MNLRGNTDTSFPSQSSMPKTVMSSGASPTMFRNRTPATRATPSCKMVTDVPRVSSFPALN
SEESNSAVNGSNNDTQLLKSKTFRSLSSSVSNPPPSRTGADFVPTMKSKKLETSVQMVRN
GLPEVAGSLPNVGNLKTSMWRVVHQFRASKISVYNPLGSGTEVAGKYNQKMIFPYELFIK
LYNSDKLELRPFGLTNCGNSCFANAVLQCLSFTLPLTAYLLQGLHSKACPKKVWCFTCEF
EDLILKAKEGKSPLSPIGILSQIQSIGSHLGCGREEDAHEFLRYAIDAMQSVCLKEAAVN
AVDQMAEETTLVGLLFGGYLRSKIKCMKCQGKSERHERMMDLTVEIQGDIGTLEEALSGF
TATETLDGENKYHCGRCKSYEKAKKKLSVLEAPNILTIVLKRFQSGKFGKLNKLVKFPEI
LNLAPYMSGTSDKSPLYQLYAVVVHLDIMNAAFSGHYVSYVKNFQGKWFKIDDSTVTPVE
LEKVLSKGAYMLLYARFSPRVSSLSRKSVISTDSKMKSGRCSEAVNNGRSTTSKSRINMV
PSSGPAMAHRVTEGYPSWMTTDGAASFESFDSDEGRFHLMHRIHEVDSLSDNSSLFSCSD
AGSCSTESTRDSTSTDDFSDYIFGELGRSWNSPRVSSDSDGSSSPLCSLSPQVNLKRHEL
DSPNTSGYETHIMDSVPEANKVWMRHPQGSSRKENLQGKGNPPFSQSDTTKQCRKSTNRC
SNSSRCSSCRETNSKKLGWINHFDVRSGVSLRRSTRERTTQTFY
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgctcgttcgcggggatctaaggttttcggacctgatcctggtcttcttcttcttcttc
gtctttcctgtcctcggcctaggcttcttcgtacgtcggaaatggaggcttgccgtcgcc
aggagggaggatatcatgagacgcgccgttttggcatccgaagaggccgtgagggctgag
ctcgaggctgctgccgagtttggcgttgcagtctccgtctccgtcgctcggccgtttcaa
tgcgcagtctgttactgccccaccaccacacgttgttctcgttgcaaggccgtgagatac
tgctctggtgagtgtcaaattattcactggagacaagggcacaaggatggatgccatcct
ccaatcacccccagcaacttcaatgatggagggagtgattctggtcaaaaggcaatattt
ggaaaacagtgcgagttttctgatgacaatttggagattgaaggcagacacatcaaacga
acagaatcctcaatagaagaacctgctccttctgagtttagttgctcatctgaagttcaa
catagaagggatgataaaattgaaccgcttattgatgccaaagcaacagacagcaaatct
gaatcttctattggctcctcattggcaggcttctctacatccactggcacctatgcaaca
gtagttgatgtttttgactgtgagttgcctattttgagcacatctgatggatcagaggga
catcaacccaaggctgataagcttgagaatatcccagatgttaaggatatggagccaatt
atattactaccctcagattttcctagttcggtcaattctgtaaatagttctttttctaat
aaattaaagcagaagaaatccagtgttgctgctggagaggattactgcaactcagctatt
tattcagattcaagctcaatatgttctttggattcaagcagcaatggacgtttgactgct
gagtctacagcttctactgatatctggggtgcagctctagattcaagtaaatctgctcat
tctagtgtcagtgaagatgctgatgacattttatgtaattcccgttctttcttaagctca
atgaacttgcgagggaatactgatacttcctttccttcacaatcttcaatgcccaagaca
gtcatgtctagtggtgcttctccaacaatgtttaggaatagaactccagccactagagct
actccctcttgtaagatggttacagatgtgcctagggtaagtagctttccagccttgaac
tctgaagagtcaaattctgcggttaatggaagcaacaatgacacacagctattgaagtct
aaaacgtttaggtctttatcatcttctgtttctaatcctccaccttctcgaacgggtgct
gattttgttccaacaatgaaatctaaaaagcttgaaactagtgttcaaatggtacgtaat
ggtttgcctgaggttgcaggttctttaccgaatgttggtaacttaaaaacttcaatgtgg
agagttgtgcatcaatttagagcctcaaaaatctcagtatacaatccattaggatctggt
actgaggttgctggaaaatacaatcaaaagatgatctttccatatgaactattcatcaaa
ctttacaattcagataaattggaactgcgtccctttggcctgacaaactgtggtaacagc
tgttttgctaatgctgtactccagtgcctgtcatttactttgcctcttaccgcctatcta
cttcaaggactccactctaaagcatgtccaaagaaagtgtggtgtttcacctgtgagttt
gaggatttaattctgaaggcaaaagaggggaaatctccactgtccccgattgggatactc
tcacaaatacaaagcattggcagtcatcttggttgtggtagagaagaagatgcccatgaa
tttttaaggtatgctattgatgcaatgcaatctgtttgcctgaaggaagctgcggttaat
gcagtagaccaaatggccgaagagacaactcttgtaggcctactatttgggggttacctt
cgatctaagataaagtgtatgaaatgccaaggcaaatctgagcggcatgaacggatgatg
gatcttactgttgagatacagggggacattggaaccctcgaagaggctctatcagggttt
acggccactgaaacattggatggagagaacaagtaccactgtgggagatgcaaatcctat
gagaaagcgaaaaagaagttgtcagtattggaagctcctaatatccttactattgtttta
aagcgatttcagtctggtaaatttggaaagctcaataagttggttaagttcccagagata
ctgaatttggctccatatatgagcgggacaagtgataaatccccattataccagctttat
gcagtggtggttcacttagacattatgaatgctgcattttctggtcactacgtgtcttat
gttaaaaatttccagggaaagtggttcaagattgatgacagcacggtaacacctgttgag
cttgagaaggtcttatcaaagggggcatacatgcttctttatgcaaggttctcaccacgg
gtctcaagtttgagtaggaaatcagtgatatctactgacagcaaaatgaaaagcggcaga
tgctcagaagctgttaacaatggaagaagtaccacatccaagtccagaattaatatggtt
cctagcagtggccctgcaatggcacatagggtgactgaaggctacccttcctggatgact
accgatggtgctgccagctttgaatcatttgattctgatgaaggcaggttccatctgatg
cacaggatacatgaagtggattcattgagtgacaattcttccctcttcagctgctcggat
gccggctcttgcagtactgaaagcacgagagactcgaccagcaccgatgatttctctgat
tacatttttggggaactaggacgcagttggaatagtccaagggtctcgtcagactcggat
ggttcttcctcccccttgtgctcactttctccccaggtgaacttgaagagacatgaattg
gattctcccaacactagtgggtatgagactcacattatggattcagtgccggaggctaat
aaagtttggatgaggcaccctcaagggagcagtaggaaagagaatttgcaagggaaggga
aaccctcccttttcacaatccgacacaactaaacagtgtagaaagtccacaaaccgctgt
agcaatagtagtagatgtagtagctgtagggagactaactcaaagaaattaggttggatt
aaccatttcgatgtgagatctggtgtatcattgagaagatctactagggaaagaactacc
caaacattttattaa
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