Telopea speciosissima (New South Wales waratah): 122658766
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Entry
122658766 CDS
T07910
Name
(RefSeq) DNA topoisomerase 3-beta
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03440
Homologous recombination
tss03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122658766
03460 Fanconi anemia pathway
122658766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tss03032
]
122658766
03400 DNA repair and recombination proteins [BR:
tss03400
]
122658766
Enzymes [BR:
tss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
122658766
DNA replication proteins [BR:
tss03032
]
Eukaryotic type
DNA Topoisomerases
122658766
DNA repair and recombination proteins [BR:
tss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
122658766
FA (Fanconi anemia) pathway
122658766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
122658766
NCBI-ProteinID:
XP_043709807
LinkDB
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Position
4:complement(56185196..56279923)
Genome browser
AA seq
845 aa
AA seq
DB search
MLQMSTRRGSTEVHEFEGRLLGSHAHFKVTSVIGHVFSVDFPPKYQDWGATDPMDLFKVP
ILKAETNPKAHICRHLSQEARGCGHLVLWLDCDREGENICFEVIECTGFNRKEAGQRVYR
ARFSSVTEKDLLKAMDNLVEPNRDEALAVDARQEIDLKVGVAFTRFQTTYFQGKYGNLDS
RVISYGPCQTPTLGFCVQRYLQITTFKPEKFWSLHPYIIHNGYELQLEWDRNKLFDIDVA
VMFQKLVADDGTLEVTNVSTKEEYKSRPPGLNTVNLLKVASSALGFGPQTAMQLAERLYT
QGFISYPRTESTAYPSSFDFKGTLREQQKNPTWGEYVGMLLADGFHKPRSGTDAGDHPPI
TPMRSATEDMLGNDAWRLYQYICQHFIGTVSPDCKYERTKVEFAAGGELFHCIGHQATVK
GFTSIMPWLAVNEKKLPQFTKGEKIKIAKLELYEGSTSPPEYLSESELISLMEKNGIGTD
ASISVHINNICERNFVQVHAGRRLVPTALGITLIRGYQCIDPDLCLPDIRSFIEHQITLI
AKGQADHFHVVQHVLQQFTRKYSYFVKQIESMDALFEAQFSPLADSGRLLSKCGKCLRYM
KYISTQPSRLYCGTCEEVYYVPQNGIIKLYKELVCPLDNFELLIFSMAGPEGKSFPLCPY
CYNNPPFEGIDTLFGALKQGSSGKLGKGAGMPCFLCPHPTCRHSMIAQGVCACPECNGTL
VLDPVSAPKWRLYCNMCNCLVFLPQGAHRISTTSKRCPECDSTIIEVDFNKKTTPLSDGA
TLHAGCILCDELLHSLVEMKHGKSFFRRMGGRGRGRGRGRGRGGSRGRGRTGGKREDPRM
SFRDF
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgctacagatgtctactcggagaggtagtactgaggtccatgaatttgaaggaagatta
ttgggttctcatgcacactttaaagtgacatcggtcattggtcatgtcttcagtgtggat
tttcctccaaaatatcaggactggggagctacagatcctatggatctttttaaagttcct
attcttaaggcagaaacaaacccaaaggctcatatttgcaggcatttaagccaagaagct
cgtggatgtgggcatctggtgttatggttggactgtgaccgtgaaggagaaaatatatgc
tttgaagtcattgagtgtacgggctttaatagaaaggaggctgggcaaagagtttatcgt
gctcgattctcttctgtgactgagaaggatcttttaaaggccatggataacctcgtagaa
ccaaacagagatgaagcattggctgtagatgcacgccaagagatagatttgaaagttgga
gttgcatttacacggtttcagactacttatttccaaggcaaatatgggaaccttgactcc
agagtcatttcctatgggccgtgccagactccaactcttggattttgtgtgcaacggtac
ttgcaaatcactacctttaagccagagaaattttggtctttgcacccttacattatacac
aacggctatgaacttcaattagaatgggatcgcaacaagttgtttgatattgatgttgct
gtgatgtttcaaaagttggtagcggatgatggcaccctagaagtaaccaatgtatcaact
aaagaagagtacaaaagtcgtcctcctggtcttaatacggtgaatttgttgaaggttgct
tcaagtgcacttggctttggacctcaaactgctatgcaactagctgaacgcttatacacg
caaggtttcatcagttatccacgtactgagagcactgcctatccttcctcattcgatttt
aaaggcactcttagagaacaacagaaaaatccaacatggggtgaatatgtggggatgcta
ctggccgatggtttccacaagcctcgatcaggaacagatgcaggtgatcatcctcccata
acacccatgcgttcagcaactgaggatatgttaggtaatgatgcttggagactgtaccag
tatatctgtcaacattttattggaactgtgagtcctgattgcaagtatgaaaggacaaag
gtggaatttgctgctggtggagaattattccactgcatagggcatcaggctacggtcaaa
ggctttacatctattatgccatggctggccgtaaatgagaagaagcttcctcagttcaca
aaaggggaaaagataaaaattgcaaaacttgagctatatgagggaagtacctcccctcca
gaatacctcagtgaaagtgagctgatttcacttatggaaaagaatggtattggcacagat
gcatccatttctgtacatattaacaatatatgcgagcgcaattttgtgcaggtgcatgct
ggaaggaggttggtaccaacagccctgggaatcaccttgataagaggatatcaatgtatt
gatccagatctttgtctgccagacattcgcagcttcattgagcaccagattacccttata
gctaagggtcaagcagatcattttcatgttgtgcagcatgtattgcagcaatttacacgg
aagtactcttattttgttaagcagattgaaagcatggatgcattatttgaagcacagttc
tctccattagcagattcagggcgtttactaagcaagtgtgggaaatgtctccggtacatg
aagtacatctccacccaaccatcgcgcctatactgtggcacatgtgaggaggtctactat
gttcctcagaatggcatcattaagctctacaaggaacttgtatgccctttggacaatttt
gagctattaatcttctccatggctggcccagaaggcaagtcattccctctctgtccgtac
tgctacaacaaccctccatttgaaggtatagacacgctttttggtgccctcaagcaagga
agctcgggaaaattgggcaagggggctggaatgccgtgctttctctgcccacacccaact
tgccggcattctatgatagctcaaggagtatgcgcctgccccgagtgcaatggcacactt
gttcttgatccagtgagtgctcccaagtggcggctttattgcaacatgtgcaactgcctt
gtcttccttccccagggagcccatcggatttcaacaacaagcaaacgttgtcctgagtgt
gactctacaataatagaagtggacttcaataagaaaacaacacctttgagtgacggggct
actttgcatgctggttgcattctttgtgatgagctgctgcattctcttgtggagatgaag
catggtaaatcattcttcagacgcatgggagggagaggaaggggaaggggaaggggaaga
gggagaggaggcagtaggggaagaggaaggaccggtggaaaacgggaggaccctaggatg
agctttcgagatttctga
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