Telopea speciosissima (New South Wales waratah): 122658772
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Entry
122658772 CDS
T07910
Name
(RefSeq) protein LATE ELONGATED HYPOCOTYL-like isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
122658772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tss03000
]
122658772
Transcription factors [BR:
tss03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
122658772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
122658772
NCBI-ProteinID:
XP_043709823
LinkDB
All DBs
Position
1:complement(87655345..87666248)
Genome browser
AA seq
771 aa
AA seq
DB search
MDVYSSGEELIIKTRKPYTITKQRERWTEDEHTRFIEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFSKMEKEALIKGIPLGKALDIEIPPPRPKRKPSNPYPRKTSTGAPQSSPVKD
GKLLTPASHLHTSKQPLDLQNDSSAEKPAQSVNSARTKEILNENNRSEALTLFQEVPCTS
YSSVSKIPASSAPKCSSTFREFVPSMKDIEDQGASDESHLTVKTKVNQKLDRTNADCKDM
NNGVIGTLNLQTSSPSSHDELVQGVRTDEPKKPEMLGLFSTDEMQINQNFPRHVPLQFVD
GISGTCMQTVGPDMTYPASIMHEHGGAHGNPNMFTNPTASASSEHYSNMSRSSVHQSVPT
FPSPFTPVCNNQDNYQSFLNFSATFSSLVVSALLQNPAAHAAASLAASFWSCTNVEALVD
SSSGTLGGFPLRQMSPPPSMAAVAAATVAAASAWWAAHGLLPLCPPLHTGINCVPSPTAA
IPSTDTGQFTVVNKGKKDNNSQVPPWEDEQLDPKFSEALKRDSASKSPPVSSVDSESGAT
MSNSSKLKDHMQKPMQVPGFHDSNKAKTRKQVDRSSCGSNTASSSEVEMDALEKHVKGEE
ESKEIDLSHASGETNYRCSRSASNVTESWKEVSEEGRIAFQALFSRQVLPQSFSRLNDLS
NGHPKSSDEERNEKGEEATLQLDLSSKKTWGTCPDHPGAEKPESLKSSNNLELGSLMMGF
GHARLKARRTGFKPYKRCSIESKENRVGNGSDPGEEKGHKRIRVEGEASAW
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatattcttctggagaagagctcattataaagacgagaaaaccatatactatt
actaagcaacgtgaaagatggacagaggacgaacacaccagattcatagaagctctgaag
ctgtatggccgagcttggcagcgtatagaagaacacattggaacaaagactgccgtgcag
attagaagtcacgcacaaaagttcttctcaaagatggaaaaagaggctcttatcaaaggc
attccacttggaaaagctcttgacatagagatacctcctccacgtcctaaaagaaaacca
agcaatccatatcctcgaaagaccagcacaggggctcctcagtcttctcctgtcaaggac
ggaaaactcttaacaccagcttcgcatctgcataccagtaaacaaccattggacttgcag
aatgactcatctgctgagaaacctgctcaaagtgtgaactctgctagaacaaaagaaatt
ctgaatgagaacaatcgctcagaagcccttactcttttccaagaggttccctgcacttcc
tactcttctgtaagcaaaataccagcatcttctgcacccaaatgctcatctaccttcagg
gagtttgtaccctcaatgaaagatatagaggaccagggtgcaagtgatgaatcccatctc
acagtcaaaaccaaagtgaatcagaaattggacagaaccaatgccgactgtaaagacatg
aataatggtgtaattgggaccctgaacttacagacatcgagcccgagttcacatgatgaa
ctggtccaaggagtaagaacagatgaaccgaagaagcctgaaatgcttggcctgttctca
acagatgaaatgcaaataaatcagaatttcccaaggcatgtccctttgcaatttgtagat
ggaatctcaggaacatgcatgcaaactgtgggccctgacatgacataccctgcatccatc
atgcacgaacatgggggagctcatggaaatccaaatatgttcacaaacccaaccgcttct
gcaagtagtgaacactatagtaacatgtcaaggtcttctgttcaccaatccgtgccaact
tttccttcccccttcaccccagtgtgcaacaatcaagacaattaccaatcctttctcaac
ttctctgctactttttcaagtcttgttgtatctgctctgttgcaaaaccccgcagcccat
gctgcagcaagcctggctgcttcattctggtcatgtactaatgtggaagctttggtagat
tcttcttctggtactctcggagggtttccattaagacagatgagcccacctcctagtatg
gcagcagttgctgctgctacagttgcagctgcatctgcatggtgggcagctcatgggctg
ttgccattgtgcccccctcttcacactggcattaattgtgttccttcacccaccgctgca
attccatccacagatactggtcaatttactgtagtcaacaaaggtaaaaaggacaataat
tctcaggttccaccttgggaagatgaacaactggatccaaaattctccgaggctctgaaa
agagactcggcttccaagtctccccctgtgtcatcagtagattctgagagtggagctaca
atgtcgaatagcagcaaattgaaagatcatatgcagaagcccatgcaggttcccgggttc
cacgactccaacaaggctaagacaagaaaacaggttgaccgttcctcatgtggttccaac
acagcttccagcagtgaagtagagatggatgcattagagaagcatgtgaaaggtgaggaa
gagtcaaaagaaattgatttaagccatgcatctggtgagactaattaccgttgcagtaga
agtgccagcaatgtgaccgagtcatggaaggaggtctcagaagagggtcggattgccttt
caagcactcttctctagacaagtactgccacagagcttttcacgtctaaatgatctgagc
aatgggcatccaaagtcaagtgatgaagaaagaaatgagaaaggtgaagaggccactttg
cagctagaccttagtagcaagaagacatggggtacttgtccagatcatccaggggcagaa
aaacctgaatcactgaaaagcagtaataatcttgagttagggtcgttgatgatggggttc
ggacatgcaaggctgaaagctcgtcgaactggatttaaaccgtacaaaaggtgttcaatt
gaatccaaggaaaacagggtgggaaatggtagtgacccaggggaagagaaaggtcacaag
aggatacgtgtggaaggggaagcgtcagcttggtaa
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