Telopea speciosissima (New South Wales waratah): 122658866
Help
Entry
122658866 CDS
T07910
Name
(RefSeq) putative indole-3-acetic acid-amido synthetase GH3.9
KO
K14487
auxin responsive GH3 gene family
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122658866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
122658866
NCBI-ProteinID:
XP_043709938
LinkDB
All DBs
Position
4:complement(64544702..64547636)
Genome browser
AA seq
607 aa
AA seq
DB search
MDGKRLEYKGKEALKELEKSTVKVGEVQEGILKDILKRNAATEYLNQFMKGSTDISTFKL
LVPVITYSSICPFIQRIANGEDSSLLSSHPITEMLCSSGTSAGEPKLTPSIAEDLDRRTF
LYNLIMPIMNQYVPGLDEGKAMYLYFTKPERSTPSGLPVRPVLTSYYKSKHFKCRSRDPF
NDFTSPDQTILCTDSRQSMYCQLLAGLLNRHHVLRLGAVFASALLRAINFLERNWVNLCN
DIRSGHLDPSITDPGCRSAMLDLLKSPNPVLADEIEAICSNKSWKGILGQLWPRAKYIEA
VVTGTMAQYIPTLEFYSAGKLPMVCTMYASSECYLGVNLKPLCDPADVAYTILPNLGYFE
FIPLGNNNNGSFLADDENEEVARGKLIDLAHVSLGCYYEIVVTTFAGLYRYRIGDVLQVT
GFHNKAPQFRFVCRRNVVLSIDTDKTSEEDLHKSVTMAKKLLEPYEALLVEYTSCTDTST
IPGHYVLFWEIVSHGQSSAMNELTQFETHVLEDCCMAVEESLDYVYRRCRTLDRSVGPLE
IRVVEPGTFESLMDFCISQGGSINQYKTPRCIKCISALNLLNSRVCGSFFSPRNPIWNLD
PLINKRN
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggatgggaagagattggaatacaaaggaaaggaagcactaaaggagctggagaagtca
actgtgaaggtcggagaagtgcaggaaggtatcttaaaggatatcttgaagagaaacgca
gcaacggaatacttaaaccagttcatgaagggatctaccgatatctccacctttaagctt
cttgttcctgtcatcacttactcctccatctgtccatttatccagagaatcgccaacggc
gaggattcttctcttttatcttctcatcccattactgagatgttatgcagttcagggact
tccgccggagaaccaaagctgacgccgtcgatcgcagaggatctggaccgtcgaaccttc
ctatataacctcattatgcccatcatgaaccagtatgtcccgggactagacgagggaaag
gctatgtacctctatttcaccaagccagaacggtcgactccctctggattaccggttcga
ccggttcttacaagctactacaagagcaaacactttaagtgccggtcacgcgacccgttc
aatgacttcaccagcccggaccaaaccatcctttgcactgatagtcgccagagcatgtac
tgccagcttctagccggtttacttaaccgacatcatgttctccggctcggtgcggtcttc
gcctctgccttactccgagccatcaacttcctcgaacgtaattgggttaacctttgcaat
gacatccggtcgggccatcttgacccatccatcaccgaccccggatgtcggtcagccatg
ttggatttactaaaatccccaaacccggttctcgccgacgagatcgaagccatctgtagt
aataagtcttggaaggggatactgggtcagttgtggcctagggccaagtacattgaggct
gtagtaactgggaccatggcccaatacatccctaccctcgaattctacagtgcagggaag
ctacctatggtgtgcaccatgtacgcatcctccgagtgctacttaggagtcaacttgaaa
cccttatgtgaccctgctgacgtggcatacaccattttgcccaacttgggctatttcgag
ttcatacctcttggcaacaacaacaacggctcttttttagcagacgacgaaaacgaagag
gtagcaagaggtaaactgatcgacctggcgcatgttagccttggctgctactacgagatc
gttgttactacttttgctggcctgtataggtatcgaatcggagatgtacttcaggtgacc
ggattccacaacaaggcaccacagttccggttcgtttgccggagaaacgtggttctgagc
atcgacacagataaaacaagtgaagaagaccttcacaagagtgtaacaatggcgaagaaa
ctcttagaaccatacgaagctttactggtggagtacacaagttgtacagatacatcaact
ataccaggccattacgtattattttgggagatcgtaagtcacgggcaatcgtcggcaatg
aacgagttgactcagttcgaaacccacgtacttgaagattgttgcatggcagtagaggaa
tcgttggattacgtatataggagatgtcgtacgttggatagatcagtgggtcccttggag
ataagagtggtcgaaccgggaacgtttgagtcattgatggacttttgtattagccaggga
ggttccattaaccaatataagacaccaaggtgtatcaagtgtatctctgcactcaacctt
ctgaactctagggtttgtggttccttctttagccctaggaatcctatatggaacctggat
cctttaatcaataagagaaattaa
DBGET
integrated database retrieval system
