Telopea speciosissima (New South Wales waratah): 122658895
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Entry
122658895 CDS
T07910
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122658895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122658895
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122658895
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_14
F-box
LRR_NXF1-5
LRR_8
Motif
Other DBs
NCBI-GeneID:
122658895
NCBI-ProteinID:
XP_043709983
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Position
4:complement(63809846..63813794)
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AA seq
583 aa
AA seq
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MAYLFPEEVLEHVFSFIHSEKDRNAISLVCKSWYEIERWCRHRIFIGNCYAVSPRITIRR
FPELRSVSLKGKPHFADFNLVPPGWGGFVYPWVAAMAQPQAYPWLEELRLKRMVVTDDTL
ELISHSFKNFKVLVLSSCEGFSTDGLASIAANCRNLRELDLRESEVNDLSGNWLSHFPES
CNSLVSLNFACLEGEVSFSALERLVGRCTNLRTLRLNQAVPLEKLPNLLRRAPQLVDLGT
GVYSAEIRPDLYSKLAGAFAGCKELKSLSGFWEVLPAYLPAIYPVCAGLTYLNLSYATIQ
SPEIIKLVSQCHNLQRLLVLDYIEDSGLYALAASCKDLQELRVFPSAPFSAVQNVSLTEQ
GLVSVSEGCPKFHSVLYFCRRMSNAALFTIARNCPNMTRFRLCILEPLTPDYLTQQPLDA
GFGAIVEHCKDLRRLSLSGLLTDQVFEYIGTHGKKLEMLSVAFAGNSDLGLHHVLSGCKS
LRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSISFGACKLLGQKMRRLNVEVIDEGE
PPDSRPDNCSVERLYVYRSVGGPRLDKPSFVWTMDQNSALRLS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatttgtttcctgaagaggttctagagcatgttttctctttcatccattccgag
aaggaccgaaatgccatttctctcgtctgcaagtcttggtacgagatcgaaagatggtgc
cggcatcggatcttcatcggcaactgctatgccgttagtccgaggattacgatcagacga
tttcctgagctccgatctgtgtcgctgaaagggaaacctcattttgctgattttaatcta
gtgccaccgggatggggaggttttgtgtatccttgggtcgcggctatggctcagcctcag
gcctatccttggttggaggagctgaggctgaaacgtatggtggtcacggacgataccttg
gaactgatttctcattcgtttaagaactttaaggttttggttctctcgtcctgtgagggt
ttcagtactgatggactcgcctccattgctgccaattgcaggaacctaagagagttagac
ttgcgggagagtgaagtgaatgatctgagtggaaattggcttagccatttcccagagtca
tgtaattcacttgtttcccttaactttgcatgccttgaaggggaggtgagcttctctgcg
ttggaacgtttagtaggaaggtgcaccaacctcaggaccctacggctcaaccaagctgtg
ccccttgaaaaacttcccaacctcctccgtcgggctcctcagctggttgatctgggtaca
ggggtctactcagctgagatccgtcctgatctctactcaaagcttgccggtgcctttgca
ggctgcaaggagcttaaaagcctgtctgggttctgggaagtgcttcctgcttatctacca
gctatctaccctgtttgtgctggactcacatatttgaacttgagctatgctactatccaa
agcccagaaatcatcaagcttgttagccagtgtcacaatctgcagcggttgttggtactg
gattacattgaagacagcggtctttacgctcttgcagcatcttgcaaggacttgcaggaa
ctgagagtatttccttcagccccatttagtgcagtacagaatgtctcattaacagaacag
ggccttgtctccgtttctgagggctgtcccaagtttcattcagtgctttacttctgccgc
cgaatgtccaatgctgccctatttaccattgctagaaactgccccaacatgacccgtttc
cgtctgtgtatccttgagcctctgactcctgattaccttactcaacaaccccttgatgcg
ggcttcggtgctatagtggaacactgcaaggatctccggcgcctttccctctctggtctc
ctcacagatcaagtttttgaatacattggcactcatggcaagaagcttgagatgctgtca
gtggcctttgctgggaatagcgacttaggcctccatcatgtgctgtctgggtgtaagagc
ctccggaagctggagatccgggactgcccctttggtgacaaggctctcttggccaatgca
tcaaagctggagacaatgcgatccctttggatgtcttcatgctctattagttttggagca
tgtaagctgttgggtcagaagatgcggaggctcaatgtggaggttattgatgagggggaa
ccaccagattctaggccagataattgttccgttgaaaggctctatgtttatcgatcggtt
ggtgggcctagattggacaagccaagctttgtttggacaatggatcagaactctgccttg
aggctctcttag
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