KEGG   Telopea speciosissima (New South Wales waratah): 122658916
Entry
122658916         CDS       T07910                                 
Name
(RefSeq) target of rapamycin complex subunit LST8 isoform X1
  KO
K08266  target of rapamycin complex subunit LST8
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss04136  Autophagy - other
tss04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:tss00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    122658916
   04136 Autophagy - other
    122658916
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tss04131]
    122658916
Membrane trafficking [BR:tss04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    122658916
   mTORC2 complex
    122658916
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st DSE1_N Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_NOL10_N Beta-prop_EIPR1 Beta-prop_DCAF4 CFAP251_N ASA1 Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_Nup120_160 Beta-prop_HPS5 NBCH_WD40 WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_Vps41 Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_IP5PC_F Beta-prop_IFT140_2nd Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_ACSF4 PAC11 Beta-prop_DCAF12 Beta-prop_SPT8 Nucleoporin_N Beta-prop_WDR35_TULP_N CFAP43_N Beta-prop_WDR19_2nd DmsR_N AF_1625_C
Other DBs
NCBI-GeneID: 122658916
NCBI-ProteinID: XP_043710005
LinkDB
Position
4:complement(49767986..49838759)
AA seq 317 aa
MSHQPSVILATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPDKQYLAAAGNPHIR
LFEVNSNSPQPVISYDSHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYESR
AAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVA
ANNHGTCYVWRLLRGNQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTV
KIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDTTARLWTMATGEAIRVYQGHH
KATVCCALHDGAESSPS
NT seq 954 nt   +upstreamnt  +downstreamnt
atgagtcaccaaccttcagtgattctcgcgacagcaagttatgatcataccatccggttt
tgggaggctaagagtggacgatgttatcgaactattcagtacccagattctcaagttaat
cggcttgaaatcaccccagataaacagtaccttgctgctgcgggaaatcctcatattcga
ttatttgaagttaactctaacagtcctcaaccggtgataagctatgattcacatactaat
aatgttatggctgtggggttccaatgtgatggaaattggatgtattcaggttctgaagat
ggcactgtaaagatttgggatttgagggctccaggctgtcaaagggaatacgaaagtcgt
gcagctgttaacacggttgttctacatccaaatcagacagaactaatatctggggatcaa
aatggaaatatacgtgtgtgggatttgaccgcaaattcttgtagctgtgagttggttcct
gaagttgatacagctgtcaggtctctcaccgtaatgtgggatgggagcttggttgttgct
gcaaacaatcatggaacatgttatgtatggcgcttgttgcgtggtaaccagacaatgacc
aactttgaaccacttcataagttgcaagcacacaatggctatatcctgaagtgtttactg
tcacccgagttctgtgaacctcacagatatctggccactgcatcatctgaccatactgtc
aagatatggaatgttgatggtttcaccttagagaaaaccctaattggacatcagcgctgg
gtttgggactgtgtgttctctgtagatggtgcctatttaataacagcatcctctgataca
acagcaagactttggactatggcaactggggaagccataagagtataccaagggcatcac
aaggcaactgtttgctgtgcacttcatgatggtgcggaatcatctccatcttga

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