Telopea speciosissima (New South Wales waratah): 122659145
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Entry
122659145 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122659145
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122659145
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
122659145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-ANAPC11
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Tmpp129
CR_prot_dom_plant
FAM163
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
122659145
NCBI-ProteinID:
XP_043710229
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All DBs
Position
1:complement(62167517..62168674)
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AA seq
363 aa
AA seq
DB search
MRRLDLLLQPPPRPLPAAIGGGIAETAGGGTASSSSSSISKGNLMPSLLIIAFILIAVLL
FSIILHLLLRYLSSYCCRSSSYRDHDLASDHSHHSHRISSRRVTPEYQSLIDSLPLFSFD
SVTGLKNSSAADCAVCLSKFEPHDRLRLLPLCCHAFHARCIDTWLASNQTCPLCRSTIHV
DESDELAKLASSSAAGDSFRVEIGSFSQQRTAVDSSGVPSTRRSYSMGSFDYVVEENSEV
VVEHMHRRGVSDYNIGRKDKDGDEAPAPNVPVPEPPGSQVAAEIAGGGRSWLKDYVDRLA
SSSSSSSFSSHTVSFRFSGGTFTGSSHRSDGVVAGAGVPGSWDLEGNWISEELGSFFRWL
SGV
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggctggatctgttgctacagccaccgcctcggcccttgccggcggctattgga
ggtggaattgcagagactgctggtggtggtactgcttcttcttcttcgtcatcaatatcg
aaaggtaatctgatgcccagcctactcatcatcgctttcatcctgatcgccgtgttactc
ttctcaatcatactccacctcctcctccgctacctgagcagctactgctgcagaagctcc
tcctatagagatcacgacctggcctctgatcactcacatcactctcaccgaatctctagc
agacgcgtgacccccgagtaccaatccctgattgactcactccctctcttctccttcgac
tcagtcaccgggctcaaaaactcatccgccgctgattgcgccgtctgtttatctaaattc
gagccgcacgatcgtctccgattacttcctctttgctgtcacgcttttcacgctcgctgc
atcgacacgtggctcgcatccaaccaaacttgccctctctgccgatcaaccatccacgtg
gacgaatcggacgaattggcgaagctagcgtcttcgtctgccgccggcgatagtttccgg
gtagaaattgggagtttcagtcaacagagaactgctgtcgattccagtggcgttcccagc
acccgtaggtcttactctatgggatcgttcgactacgtggtggaagaaaactccgaggtg
gtggtggagcacatgcacaggcgaggagtttctgattacaatattggacggaaggataaa
gatggcgacgaagctccggcaccaaatgtgccagttcctgagccgccgggatctcaagtg
gcggcggaaattgccggcggcgggaggtcatggttgaaggattacgtggacagattggct
tcttcttcttcttcttcgtctttttcgtctcatactgtatcatttcgattttcaggggga
acttttaccggaagtagtcaccggagcgatggtgtcgtcgccggtgctggggtacccggg
agttgggatttggaaggaaactggatcagcgaagaactgggtagcttctttcgttggttg
tctggggtatga
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