Telopea speciosissima (New South Wales waratah): 122659871
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Entry
122659871 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122659871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122659871
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122659871
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
HECT type E3
122659871
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
Arm
HEAT_EZ
TFIIA
Motif
Other DBs
NCBI-GeneID:
122659871
NCBI-ProteinID:
XP_043710953
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All DBs
Position
4:complement(10554976..10569969)
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AA seq
1910 aa
AA seq
DB search
METRSRKRAEASSAAPSSQPTTRSSKRARVSASSSSAPSVSTISTRSRQNSRSQESVVVM
DSTTESSGSAARRESGGRRGKNQGLDRDKDSDKGKEKEPEVRVRDRDRDRDRERDVERSL
GLSIDGGGGVDDDNDSEGGVGILHQNLTSASSALQGLLRKLGAGLDDLLPSSAVAATSSS
HQSGRLKKILAGLRADGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHE
SNADIMLLAARALTHLCDVLPSSCAAVVHYGAVSCFCARLLTIEYMDLAEQSLQALKKIS
QEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADYVMEAVPLLTNL
LQYHDSKVLEHASVCLTRIAEAFTSSPEKLDELCNHGLVAQAASLISISNSGGGQASLST
STYTGLIRLLSTCASGSPLGSKTLLLLGISGTLKDILSGSGLVASISVSPALTKPPEQIF
EIVNLADELLPPLPQGSISLPTCTNFLVKGSVGKKSPATSSGKQEDTNGTVPEISAREKL
LQDQSELLQQFGMDLLPVLIQIYGSSVNGPVRHKCLSVIGKLMYFSTADMIQSLLSVTNI
SSFLAGVLAWKDPQVLIPALQIAEILMEKLPGTFSKMFVREGVVHAVDTLIMADSSRMVA
AQASSVDKDNDPAPGTSSRSRRYRRRSGCPNPDGNSLEESKSVLPGSVGSPPTSVEIPTV
NSSLRMAVSACAKAFKDKYFPADPEAAEVGVMDDLLRLKNLCMKLNAGIDDQKTKAKGKT
KASGSHLGDLSATNEEYLIGMISEMLTELRKGDGVSTFEFIGSGAVAALLNYFSCGTSSK
EKASKANLQKLRQQALRRFKLFIAVALPVGIDDGKGAPLGILVQKLQNALSSLERFPVVL
SHSSRSSSGSSRLSSGLGALSQPFKLRLCRAQGEKSLRDYSSNIVLIDPLASLAAIEEFL
WPRVQRGESGQKPSASPGNSEPGNTPTGTGASSPSMSGPASARRHSTRSRSSMTIGGAAR
KDSPHEGNASSSKGKGKAVLKSALDEARGPQTRNAARRRAASDKDAQMKPAHGGDSSSED
EELDISPVEIDDALVIEEDDLSDDDDDDDHEDVLRDDSLPVCMPDKVHDVKLGDSAEDGN
AAPATSDSQTNPSSGSSNRAATVRGMDSTEFRSGSSFSSKGGMSFAAAAMAGLASAGGRG
IRGGRDRRGFSVTGGSNDPAKLIFTAGEKQLNRHLTIYQAIQRQLVLDEDDDERFTGSDF
FPSDGSRLWNDIYTITYQKADSQIDRSSAGGSTSTTSKSAKASSASNSNSDTLGHQTSLL
DSILQEELPCDLEKANPTYSILALLRVLEGLNQLAPRLRVMSISDDFSEGKISSLDELKT
TGAKVPPEEFINSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYS
TAFGLSRALHRLQQQQGADGPGSTNEREVRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQ
KAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKASLGMWRSNSLSDKATMEVDGDNQKASK
TEDTSDMKKLGLDSTVEGRDVVQAPLGLFPRPWPPNTDASDGGQFSKILEYFRLVGQVMA
KALQDGRLLDLPLSMAFYKLVLGQELDLHDILSFDAEFGKILQELQVLVCRKNYLDAMGG
SNQNAVADLRFRGAPIEDLCLDFTLPGYPDYVLKPGAENEMVDINKLEEYISLVIDATVK
TGIMRQIEAFRAGFNQVFDISSLQIFSPSELDYLLCGRRELWEAETLVDHIKFDHGYTAK
SPAIVNLLEIMGEFAPEQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTTTNSASN
GAGSESVDDDLPSVMTCANYLKLPPYSSKEIMYKKLLYAISEGQGSFDLS
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcggagtcggaagcgggcggaggcctcctcagcagccccttcatctcaaccc
actacccgttcgagtaagagagctcgtgtctctgcatcatcatcttcagctccctccgtt
tcaacaatttccacccgttcccgccagaattcacggtctcaagaatcagttgtagttatg
gattccaccaccgaatcgtctgggtctgctgcccgccgtgaatcgggaggccggcgtgga
aaaaatcagggtttggatagggacaaggactccgataagggtaaagagaaggagcccgaa
gttagggttagggatagggatagggacagggacagagagagggacgtcgagaggagcttg
ggtttgagtatcgatggcggcggcggggttgacgatgataatgacagtgaaggcggtgta
ggaattctgcatcagaatctgacgtctgcaagcagcgctctccaagggctactccggaaa
ctcggtgctgggctggacgatttactgccctcgtccgcagtggcggcgacctcctcctct
caccagagcgggcgactgaagaagatattagctgggttgcgagcggatggggaagaaggg
cgtcaggttgaggccctaacacaactctgcgagatgctctctattggaaccgaggaatca
ctaagcacattctcggttgactcgtttgtgcccgtgcttgtgggactgcttaatcacgag
agcaatgctgacatcatgctacttgctgccagggctctgacccatctctgtgatgtgctt
ccgtcgtcctgtgctgctgtcgttcactatggcgctgtgtcctgcttctgtgcacggctg
ctcaccatcgagtacatggacttggcagaacagtctctgcaagctcttaaaaagatatct
caagaacatccaacagcctgtttacgagctggtgcacttatggcagtgctatcatatctt
gactttttctccacgggagttcagcgtgtggcattgtcaactgctgccaatatgtgtaag
aaactcccttcagatgcagctgattatgtgatggaagcagtgcctctgctcactaacctt
cttcaatatcatgattcaaaggttttggagcatgcttctgtttgcttaacacgaattgct
gaggcattcacatcttctcctgagaaattagatgaactttgcaatcatggactggttgcc
caagctgcctctcttatttccatcagtaactctggaggtggtcaggcttctttgagcaca
tctacttacacgggtttaattcgtcttctttcaacatgtgcaagtggatcccctttagga
tctaaaacactcctcctcctcgggatcagtggcacactaaaagatattctttcaggttca
ggcttagttgcgagcatttctgtttcacctgcattaactaaaccaccggagcagattttt
gagattgtcaaccttgcggatgagcttcttccgccactgcctcaggggagcatttccctt
ccaacctgcactaattttctagtgaaagggtcagttggaaagaagtctcctgctaccagc
tctgggaagcaggaagacactaatggaactgttcctgagatttctgctcgtgagaagtta
ttgcaagatcaatctgagcttctgcagcaatttggaatggatcttctgcctgttctaata
cagatatatggatccagtgtcaatggtccagttcgccacaaatgtctttcagttattggg
aaattgatgtatttcagtacagcagacatgattcagtctttactaagtgtaactaacata
tcaagtttcttagctggtgttttagcttggaaagatccgcaagtcttgattccagccctc
cagatagcagagattctcatggaaaagcttcctgggactttctcgaagatgtttgtcaga
gaaggagtggtacatgctgtagacacacttataatggctgattcatcaagaatggttgct
gcccaagcatcttcagttgataaagataatgatcctgcacctggaacatcatcacgttct
aggcgttatcgacggcgcagtggctgcccaaatccagatggaaattcgttggaagagtca
aaaagtgtcttacctggaagtgttggttctcccccaacttcagtagaaattccaactgtt
aattctagtcttcgcatggctgtcagtgcttgtgcgaaagcattcaaggataaatatttc
cctgctgaccctgaagcagctgaagttggagtgatggatgatcttctacgtttgaagaat
ctttgcatgaagttgaatgctggcattgatgatcaaaaaaccaaagctaagggcaaaaca
aaagcttctggttctcaccttggtgatctttctgccaccaatgaagagtacttaattgga
atgatatctgagatgctgactgaactgcgcaaaggagatggtgtatccacatttgagttc
attggcagtggggccgttgcagctttgctaaattacttttcttgtggaacttcttctaag
gagaaggcatcaaaggctaacctacagaagcttcggcaacaagcacttaggaggtttaag
ttattcattgcagttgcccttcctgtcggcattgacgatggaaagggagctcctctgggt
atcttggtacagaaactgcaaaatgctttatcctccttggagcgattcccagttgttttg
agccattcatctaggtcatctagtggaagttcacgtctatcctcgggacttggtgcgttg
tcccagccctttaagctacgtctgtgcagagctcaaggagaaaaatctcttcgtgattat
tcttcgaacattgtactcattgatcctttggcaagtttagcagctattgaagaatttctt
tggccaagagttcagcgaggtgaatctggtcagaagccttcagcttctccaggaaactct
gagcctggtaacacacccactgggactggtgcttcatcaccgtctatgtctgggcctgct
tctgctcgtcgtcattcaactcgatctagatcttcaatgaccataggaggtgcagctaga
aaggattctccacacgagggaaatgcaagctcttcaaaaggtaagggtaaagctgttctt
aaatcagctctagatgaggcaagaggacctcagacaagaaatgctgctcgtagaagagca
gcttcagataaagatgcacagatgaaaccagcacatgggggtgattctagctctgaggat
gaagagttggatatctctccggttgagattgatgatgcattggtgattgaagaggatgat
ctctcagatgatgatgacgacgacgaccatgaggatgtgctgagagatgattctcttccc
gtttgcatgcctgataaggttcatgatgtgaaattgggagattcagctgaggatggtaat
gctgctcctgcaacaagtgatagccaaactaatccttcctctggttctagcaatagagct
gcgacagtacgaggcatggactcaacagagtttaggagtggcagctcctttagttcgaag
ggtggaatgtcatttgctgcagctgctatggctgggcttgcatcagcaggtggtagaggt
atcaggggtggccgagatcgccgaggattttctgtaactggtggttcgaatgatccagcc
aagttaatatttacggcgggtgaaaagcaacttaataggcacttgactatatatcaggca
atacaacgccaacttgtgctcgacgaagatgatgatgagaggtttactggctctgatttt
tttcctagtgatggaagcaggctgtggaacgatatatataccatcacataccagaaagca
gacagccaaatagataggagttcggcaggaggttccacttcaactacatcaaaatctgcc
aaagctagttcagcttccaactcaaactccgacactttggggcaccaaacttcccttctt
gatagcattttgcaagaggagcttccatgtgatcttgagaaagctaatcctacttatagc
atattggcattgttgcgtgtgttagagggtctgaatcagcttgcaccccgtttgcgagtc
atgtctatttcagatgatttctcagaggggaagatttcaagtctagatgagcttaaaaca
actggtgcgaaggtaccacctgaagaatttatcaatagcaagctcactccaaaattggct
aggcagatccaggatgcccttgcattgtgcagtggcagtcttccttcatggtgttaccaa
ctaacaaaggcatgcccatttttgtttccttttgaaactaggaggcagtatttctattca
actgcctttggattgtctcgggcattgcatcgactgcagcagcaacagggtgctgatggg
cctggctcaacaaatgaaagagaggtacgtgttgggagattacagcgtcaaaaggttcgt
gtttcaagaaatagaattttggattctgctgcaaaagttatggagatgtattccagtcaa
aaagccgttctagaagtggagtactttggtgaggttggcacgggattgggtcctacacta
gagttctatacccttttgagtcatgacctgcagaaagctagtttgggcatgtggaggtca
aattccttgtcagacaaagccacaatggaagttgatggagacaaccagaaagccagtaaa
actgaagatacttccgacatgaagaaacttgggctggactctacagtggaaggcagagat
gtagtacaagctcctcttgggttgttccctcgtccttggccaccaaatacagatgcttcc
gatggtggccagttttctaaaatccttgaatattttcggcttgttggacaagtgatggca
aaagctcttcaagatggccggcttttggaccttccattgtcgatggccttttataagctt
gttcttggtcaggagcttgatttgcatgatattctttcatttgatgctgagtttggaaag
atcctgcaagaattacaagttcttgtttgccgtaagaattatctggatgcaatgggtggt
agtaatcaaaatgcagtggctgatttacgcttccgtggtgctcctattgaagatctctgt
ttggattttacacttcctggctatcctgattatgttttaaaacctggagcagaaaatgaa
atggtggatattaataagttggaggaatacatttctttagtcattgatgcgactgtcaag
acaggaattatgcggcaaatagaagcatttagagcagggtttaatcaggtcttcgacatc
tcatcgttgcaaatattttctcctagtgaactagactacttactctgtgggcgaagagaa
ttatgggaggctgagactctggttgatcatataaaatttgatcatggatacactgctaag
agccctgctattgttaatttgctggagattatgggagagtttgcacctgagcagcagcgt
gcattctgccagtttgtaactggtgctccaaggctcccacctggtggtctggctgtgctg
aatccaaagctgacaattgtgagaaagcattcttcgaccacaacgaactcagcatcaaat
ggggctggttctgaatcagtggatgatgaccttccaagtgtcatgacttgtgctaactat
ctcaagcttcctccctattctagcaaggaaattatgtataagaaactattatatgccatc
agcgaagggcagggatctttcgacttgtcctga
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