Telopea speciosissima (New South Wales waratah): 122660142
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Entry
122660142 CDS
T07910
Name
(RefSeq) phytochrome B
KO
K12121
phytochrome B
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
122660142
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Gene cluster
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HisKA
HATPase_c
PAS_9
PAS_4
PAS_3
PAS_8
CxC1
Motif
Other DBs
NCBI-GeneID:
122660142
NCBI-ProteinID:
XP_043711260
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All DBs
Position
4:complement(66277022..66319876)
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AA seq
1127 aa
AA seq
DB search
MASGSKATYAHQSHSSGGSNIRSHQGDSVNKAIAQYTVDARLHAVFEQSGESGKSFDYSQ
SVKTTTQSVPEQQITGYLSKIQRGGHIQPFGCMIAVDESTFRVIAYSENATEMLDLNPQS
VPTLEKPETLTAGTDVRTIFTPSSSLLLEKAFSAREITLLNPLWIHSKISGKPFYAILHR
IDVGIVIDLEPARAEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDTVVEHVREL
TGYDRVMVYKFHDDEHGEVVAESKRQDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDC
HASPVRVIQDEDLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGSDDEGTSG
RNSMKLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTL
LCDMLLRGSPTGIVTQSPSIMDLVKCDGAALYFQGKYYPLGVTPTEAQIKDIAEWLLAHH
GDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHP
EDEDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEGSNSKAVV
NTQLGEVELQGVDELSSVAREMVRLIETATAPIFAVDSHGCINGWNAKVAELTGLSVEEA
MGKSLVQDLVHKDSAEVSDKLLFRALRGEEDKNVEIKLRTFGSQQLIKAVFVVVNACSSK
DYMGNIIGVCFVGQDVTGQKVVMDKFIHIQCDYKSIVQSPNPLIPPIFASDDNMCCSEWN
TAMEKLTGWGRGDIIGKMLVGEVFGSCCRLKGPDAMTKFMIVLHNAIEGQETDKFPFAFF
DQNGKYVQALLTANKRVNMEGQNIGAFCFVQIASPELQQALEVQRHQERKRFARMKELAY
ICQEIKNPLSGIQFTNSLLEATDLTEDQKQFLETSAACEKQMLKIIRDVDLESIDDGSLE
LDKAEFLLGSVINAVVSQVMILLRKRGLQLIRDIPEEVKTLAVYGDQIRIQQLLADFLLN
MVRYALCPEGWVEIHVCPSLRQISDGTELVHLEFRMMCPGEGLPPEIIQDMFHSSRWVTQ
EGLGLSMCRKILKLMNGEVQYIRESERCYFLIILELPMPRRASKRVD
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggtagcaaagcaacttatgctcaccaaagccattcttcagggggaagcaac
atccgatcccaccaaggagactccgtaaacaaagccattgcacagtacaccgtcgatgct
cgcctccatgccgtcttcgaacaatccggcgagtccggtaagtccttcgattactcccaa
tccgttaaaaccaccacacaatctgtccccgaacagcaaatcaccggctacttgtccaaa
attcagaggggcggtcacatacagcccttcggctgtatgattgcagtcgatgagtccact
ttcagggtcattgcttacagcgaaaacgccaccgaaatgctcgaccttaatccgcagtca
gtccccacccttgagaaacccgagaccctcacggctggtactgatgtccgtacaattttc
acaccatccagctctcttctccttgagaaggccttcagtgctcgggaaatcacgttattg
aatcccctctggatccattccaagatttctgggaaacccttctacgccatcttgcatagg
attgatgtgggaattgtaattgacttggagcctgcgagggctgaggacccagctctgtca
attgctggtgccgtgcagtcacagaagctcgctgtccgtgccatctcccgtttacagtcg
ctccccggtggggatatcaagcttctttgtgatactgtggttgaacacgtccgggagctc
accggttatgaccgggttatggtgtataagttccatgatgacgagcatggtgaggttgtg
gccgagagcaagcgacaagacttggagccttatatcggtttacactatcctgctactgac
atcccccaggcctcgaggttcttgttcaagcaaaaccgggtcagaatgattgtcgactgc
catgcctctcctgttcgggttattcaggatgaagatctaatgcagcctctgtgcttggtt
ggttcaacgctccgggccccacatgggtgccacgctcagtacatggccaacatgggctcg
atcgcctcactagctctggcagtaattatcaatgggagtgatgatgagggtacttctgga
cgtaactctatgaagctttggggccttgttgtgtgtcaccacacttctgctcgatgcatc
ccattccccctccgttatgcctgtgaattccttatgcaggccttcgggcttcaactcaat
atggaattgcaattagcttctcaattgtcagagaagcacgttttgcggacccaaactctt
ttgtgtgacatgcttctccggggttcccccactggaattgtcacccagagccccagcatc
atggatcttgtcaagtgcgatggggctgctctctacttccaaggcaagtattatccgctt
ggagtcacccctactgaagcccagataaaggacattgccgagtggttgttggctcatcat
ggggactctacaggtttgagcacagacagcttagctgatgctggataccctggggcagcc
tcccttggtgatgcagtttgtggaatggctgtggcttatatcacttctaaagatttcttg
ttctggttccgctcccatactgccaaagaaattaagtggggaggagcaaagcatcaccca
gaggatgaggatgatggacagaggatgcacccacgctcttcatttaaggcgttcttggaa
gtggttaagagccgcagtttaccttgggagaatgccgagatggatgcaattcactcattg
cagcttatactgcgagactcgtttagagatgctgaggggagtaattctaaggctgtggtc
aatacccagcttggggaagtggaattgcagggagtggatgagcttagctcagttgctaga
gagatggttaggctgatagagactgcaactgctccgatttttgctgtggactcccatggc
tgtataaatgggtggaatgcaaaggttgcagagcttacaggtctctcagttgaggaagct
atggggaagtcactggttcaggaccttgttcataaagactctgcagaggtttctgacaag
ctgctatttcgtgctttaagaggtgaagaagataaaaatgtagaaataaagctcaggaca
tttggttcacaacagcttataaaggctgtctttgtagttgtcaatgcctgctctagcaag
gactacatgggtaacattattggggtttgcttcgttggtcaggatgtcactggtcagaaa
gtggtaatggacaagttcatccatatacagtgtgattacaagtctattgtacaaagcccc
aaccctctgataccacctatatttgcgtcagatgataatatgtgttgttcagaatggaac
acagccatggaaaagctcactgggtggggaagaggggacatcatcgggaagatgttggtg
ggggaggtttttggcagttgctgtcgacttaaaggcccagatgctatgactaaatttatg
attgtgttgcacaatgcaatcgaagggcaagagacagacaagtttccgtttgccttcttt
gaccagaatgggaaatatgtgcaggctctcttgacagcaaataagagggttaatatggag
ggccagaatattggtgcgttctgttttgtgcagattgcaagcccagaactgcagcaagct
ctggaagtgcagaggcatcaagagaggaaacgctttgcaaggatgaaagagttggcctac
atttgccaggaaataaagaatcctctaagtgggatacagtttactaattcactgttggag
gctacggacttaactgaggatcagaagcagtttcttgagactagtgctgcttgtgagaag
cagatgctgaagataattagggatgttgatctggaaagcattgatgatggttccttggag
cttgacaaggctgaatttttacttgggagtgttataaatgctgttgttagccaagtaatg
atactgctgaggaagagaggtttacagttgatccgggacattccagaggaagtcaaaaca
ctggctgtttatggtgatcaaataagaattcaacaattgttggctgatttcttgttgaat
atggtacggtatgcactgtgtccagaaggttgggtggaaattcatgtttgtcctagtttg
aggcagatctcagatggaacagagcttgtgcatcttgagttcaggatgatgtgcccaggg
gaaggccttcctccagaaattatccaagatatgttccatagcagccggtgggtaacccag
gaaggcttgggcctgagcatgtgcaggaagattctaaagctaatgaatggtgaagtccaa
tatatcagggagtctgaaagatgttacttcctcataatcctcgaacttcccatgcctcgg
agagcttccaagagggtggactag
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