Telopea speciosissima (New South Wales waratah): 122660188
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Entry
122660188 CDS
T07910
Name
(RefSeq) amino acid transporter AVT1A isoform X1
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122660188
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tss02000
]
122660188
Transporters [BR:
tss02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
122660188
SSDB
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Paralog
GFIT
Motif
Pfam:
Aa_trans
DUF8641
DUF6556
Motif
Other DBs
NCBI-GeneID:
122660188
NCBI-ProteinID:
XP_043711323
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Position
4:29501402..29555002
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AA seq
536 aa
AA seq
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MMKEKDSEFFMENGMDDEETGEDCNGNISNSSDGEAEEKSQKGSSSSSSLSPFSSQQWPR
SYRETTDSYTIAASPIVTSLIRVPSIRYSSFDLGTKSNLDIDGKSPLLPDYERLHQGKDE
SESRIQSILSEKSYMHEQLSGELPIGYGCSLTQTVFNGINVLAGVGLLSTPFTVKEAGWA
SLGILLIFAAVCCCTGIFLKYCFESKEGILTYPDIGEAAFGRFGRLFISIILYTELYSYC
VEFIILEGDNLTRLFPGTSLDWNGFHLDSLHFFGILTALIVLPTVWLKDLRVISLLSAGG
VIATILIVVSVFFVGTFDGIGFHQTGPALNWSGVPFVVGVYGFCYSGHSVFPNVYQSMSD
KTQYNKALIICFILCTAIYGGVGIMGYLMFGQGTLSQITLNMPNHSFASKVALWTTVINP
FTKYALLMNPLARGLEELLPARFSNETWCFILLKTGLVVSTVCVAFLLPFFGLVMALIGS
LLSILVAVIIPSLCFLKIVRKATRLQVILSCSIAGLGIISAGLGTYSSLSRIANKY
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaggagaaagattctgagtttttcatggagaacggtatggatgatgaagagaca
ggagaagactgcaatggtaacattagcaatagcagcgatggagaggcagaggagaaaagt
cagaaagggagtagtagttcgagttcgttgtctcctttctcttcccagcaatggccccgg
agttacagggaaactactgattcctacacgatagctgcgtctccaatcgtcactagcctc
attcgggtccctagtattaggtattctagtttcgaccttggtaccaaaagtaatctggac
atcgatggaaaatctccattgctgcccgactatgaaagattacatcagggaaaagatgaa
tcagaatcaagaatccagtcaattttgtcggagaagtcctacatgcatgagcagctgagt
ggagaactaccgattggttatggatgtagcttaactcagacggtcttcaatgggataaat
gtcttggctggtgttgggcttctttctacaccatttactgtgaaagaagctggttgggca
agtttgggtatcctactcatttttgctgctgtttgttgttgtacgggcattttcttaaaa
tactgttttgaaagcaaggaaggtattttgacctacccggatattggagaagctgcattt
gggagattcgggcggcttttcatatcaatcattttgtacactgagctatattcatattgt
gtggaatttattattctggaaggtgataatcttacaaggctattccccggaacttctttg
gattggaatgggtttcatttggactctctgcacttctttggaattttaactgctcttatt
gttctaccaactgtttggttgaaggatctccgtgtgatttctttactttcagctggtgga
gtgattgcaacaattttgatagttgtttcagtcttttttgttggtacctttgatgggatt
gggttccatcaaacaggtcctgcgctgaactggagtggtgtcccatttgttgtcggggta
tatgggttctgctattctgggcattcagtgtttccaaatgtttaccagtcaatgtctgat
aagacacagtataacaaggcattgataatatgctttatcttgtgtactgcaatatatgga
ggtgttgggatcatgggatatctcatgtttggtcaaggtactctgtctcagataactttg
aatatgccaaaccattcttttgcttccaaagttgctttgtggacaacagttatcaatcct
ttcacaaaatatgctttgttgatgaatccgttggccaggggtttggaggagcttcttcct
gctagattctctaatgaaacttggtgttttattctactgaaaaccggacttgtcgtttca
actgtttgcgttgcttttcttttgccattttttggtcttgtgatggctttaattggttct
ctcctcagcatacttgtggctgttataattccatctctatgttttctaaagatagtgagg
aaggcaacccgattacaggtaattctgagttgctcaatagctggattgggcatcatcagt
gctggtctaggaacatattcttcattgtcccgaattgcaaataaatactga
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