Telopea speciosissima (New South Wales waratah): 122660204
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Entry
122660204 CDS
T07910
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122660204
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tss01002
]
122660204
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122660204
04121 Ubiquitin system [BR:
tss04121
]
122660204
Enzymes [BR:
tss01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122660204
Peptidases and inhibitors [BR:
tss01002
]
Metallo peptidases
Family M67
122660204
Membrane trafficking [BR:
tss04131
]
Endosome - Lysosome transport
Others
Others
122660204
Ubiquitin system [BR:
tss04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
122660204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
122660204
NCBI-ProteinID:
XP_043711354
LinkDB
All DBs
Position
4:67605859..67633070
Genome browser
AA seq
521 aa
AA seq
DB search
MKPLDRPINVNAMTRKINVDNRIPLRHYYRIADNLIRQASIYREEKNIIDLYIILLRFCS
LLSETIPLHRDYQLLLPKERVFYRRKLLDVIEELERMKAEFNRRLDELNKARTIAQLNCL
ENTSNISTVSSTEYPSIKKSISSNLDIKQVQLHPASRNALHSSWKHHNTVTQVASPKTLQ
IEKQFQKMSFSLPLPKEETLSRHSFLGPTGLHGQWQGPIAGTKVQYPSSADIPSTEDLGL
NQTGKDGHVATKNGDPGEARSTMESVLSLDDGSWLQPAEDSCSLSTVERREDSFELNNIW
QPSPPPVLAQVQQEYLPIHPSKVADPRPGPAKSLPEGMSDSSSYQHLHIPVKMMEDFLRL
AQANTAKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTMNEEEIFDIQDKLSLFP
LGWIHTHPSQTCFMSSVDLHTHYSYQVMLPEAIAIVMAPTDTSRQHGIFHLSDPGGISVI
RNCQERGFHPHEEPDDGNPIYEHCSHVYMNTKLKCDIVDLR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctctagacaggccgatcaacgttaacgccatgactcgaaagatcaatgttgac
aatcggatcccccttcgtcattactaccgaatagcagataatcttatcagacaggctagt
atctaccgagaggaaaagaatatcatagatttgtatattatacttctcagattttgcagt
ttgctgtctgaaactataccactccaccgtgattaccagttattgcttccaaaagaaagg
gtcttttacagacggaaactgcttgatgtcatagaggaactggaaaggatgaaggcagag
tttaatcgtcggttggatgaactgaacaaagcacgtaccatagcccaattgaattgccta
gaaaatacttcaaatatttcaacagtctcttctacagaatatccctccattaaaaagtca
atttcatcaaacttggatattaaacaggtgcagctgcacccagctagcagaaatgcattg
cactcttcatggaagcatcacaatacggttactcaagttgcatcaccaaaaaccctgcaa
attgagaagcaattccagaagatgtctttcagcctaccccttcctaaggaggaaacattg
tccagacactcatttttaggtccaactggtctccatggtcagtggcaaggacctattgca
gggacaaaggtgcagtatcctagcagtgctgacataccttcaactgaagatttgggcctg
aaccagactggaaaagatggtcatgtggcaacaaaaaatggtgatcctggagaggctaga
tctacaatggaatcagtgctttccttagatgatggtagctggttacagcctgctgaggat
tcatgttctttgtcaactgtggagaggagggaagatagttttgagttgaataacatctgg
caaccgtcgccaccgcctgttcttgcacaagtacagcaggagtaccttccgattcatccg
tcaaaagttgctgatccaagacctggaccggcaaaatctttaccggaagggatgtctgac
tctagttcttatcagcatttacacattccagttaaaatgatggaggactttctgagactg
gcacaagcaaatacagcaaaaaatctagaaacttgtggagttcttgcgggttctcttaaa
aacagggttttccatatcactacgctaataattccaaagcaggagtccacttcagattca
tgccagacaatgaatgaggaagaaatttttgacattcaagacaaactttcccttttccct
cttgggtggattcatacacacccatcgcagacttgcttcatgtcatcagttgatcttcac
actcattattcatatcaggtcatgttaccagaagcaattgcaattgttatggctcccaca
gatacatccaggcagcatggcatctttcatctttcggatccaggaggtatatctgtgatt
cgtaactgtcaagagcgtgggtttcatcctcatgaagagcctgatgatggaaacccaatc
tatgagcactgttcccatgtttatatgaacaccaaattgaagtgtgatattgttgatctt
cggtaa
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