Telopea speciosissima (New South Wales waratah): 122660560
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Entry
122660560 CDS
T07910
Name
(RefSeq) ubiquitin fusion degradation protein 1 homolog isoform X1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122660560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tss03009
]
122660560
Ribosome biogenesis [BR:
tss03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
122660560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
122660560
NCBI-ProteinID:
XP_043711858
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All DBs
Position
4:3243624..3255909
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AA seq
317 aa
AA seq
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MFFEGYGYHGTSFEQTYRCYPASFIDKPQLEGGDKIIMPPSALDRLASLHIDYPMLFELR
NAAAERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDTVRVKNMTLPKGTYVKLQPHTM
DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPANAISIIETDCEVD
FAPPLDYKEPERQAPSVPISKAPAPVEEAVLEPTFSPFTGIGRRLDGKSFNHQHPPVSSP
ASKDKQPGAANGRPSAASTSQSTRQPQGKLVFGSTANHGQKETQNQQHVKDSKQEEALKK
EEPKFQAFTGKKYSLKG
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgaaggttacggataccatggaacatcatttgagcagacataccgttgttac
cctgcttcttttatcgataagcctcagttggaaggtggggataagattataatgcctccc
tcagcccttgaccgccttgcatctcttcatattgattatccaatgttgtttgagcttcgt
aatgctgctgctgagcgggtttcacattgcggtgttctggagttcattgctgaagaagga
atgatctacatgccatattggatgatggaaaacatgctgttacaagagggagacaccgtg
cgggtgaaaaacatgactcttccaaaaggaacatatgtaaagttgcagcctcacacgatg
gatttcttagatatctccaacccaaaagccatcttggagactacattgaggaacttctcc
tgcttgaccacgggagacagtatcatggtagcctataacaataagaagtattacatagat
atcatagaaacaaagcctgctaatgcgataagtattattgagacagattgcgaggtggat
tttgcacctcctcttgattacaaggaacctgaaagacaggcaccatcagtacctataagc
aaggcacctgctccagttgaagaggctgtgctagaaccaactttcagcccatttactggt
attgggagacgcttggatggcaagtcatttaatcatcaacacccaccagtttcgtctccc
gcatccaaagacaagcagccaggggctgccaacggtaggccttcagctgcatctacttca
caaagtacccgtcaaccccaggggaagcttgtgtttgggtcaactgcgaaccatggtcaa
aaagaaacccaaaatcagcaacatgtgaaggactcaaagcaagaggaagccctaaagaaa
gaagagcccaagtttcaagctttcacagggaagaagtactcattgaaggggtga
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