Telopea speciosissima (New South Wales waratah): 122660561
Help
Entry
122660561 CDS
T07910
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tss03016
]
122660561
Enzymes [BR:
tss01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
122660561
Transfer RNA biogenesis [BR:
tss03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
122660561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_25
Methyltransf_31
Methyltransf_12
Motif
Other DBs
NCBI-GeneID:
122660561
NCBI-ProteinID:
XP_043711860
LinkDB
All DBs
Position
4:64840216..64847787
Genome browser
AA seq
475 aa
AA seq
DB search
MEEGRCKFWLPKKNRFCSNRRLSDSLFCGNHNPKSEEQRVTCPLDPSHSVLQENLESHLR
RCPFLKQLQSLKQQPFYKKGINGGRDDDVDDVKVNSKDAENFTFSNKELPLPSDDITSNM
KRNAVYNMTVPEFSQLMRKIESIHSSISSEIHELYNIPEVCGIWINKGIDRKLPFQEKHV
LQQASILGNLADFGILENPVGNIVCPNIAEPLYSNGSSGDKVPAVVEFGAGRGYLTQILA
DCYGIKKVFLVERKSYKLKADRSLRQTENLTLERLRIDIEDLNLDAVESLRGVPYLAIGK
HLCGPATDLTLRCCLPKQSQEDKATHSTCSRYLRGLAIATCCHHLCQWKHYINKRYFLNL
GIRKDDFHAITWFTSWAVDADHGSDLSNSLDHGLHPLSICVKKYCGVGAQGVEEIVKNME
AMDRAVLGLMCKEIIDMGRIMWLKEQGLATKLTKYVPSNISPENHLLIAKNRYCL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggacgctgcaagttctggctccccaagaaaaatcgattctgttcgaacaga
cgtctcagcgattccctgttctgcggaaaccacaaccctaagtctgaagaacagagggtt
acatgtccactagacccctctcattctgtactgcaagaaaatttagaatcacatctgaga
agatgcccgtttctgaaacaactccaatccttgaaacaacaacctttctacaaaaaggga
atcaatggcggaagagatgatgacgttgatgatgtgaaagtcaattcgaaagatgccgaa
aacttcaccttttcaaataaagagctgcctcttccctcggatgacattacctcaaacatg
aagaggaatgcagtatataacatgaccgtcccagaattttcccaactgatgagaaagata
gaatcgattcacagttctatcagttcggagattcacgagttgtataacatacctgaagtt
tgtggcatatggattaataaaggaatagatcggaagttgccgttccaagagaaacatgtt
ctgcaacaggcgtcgattctcgggaacttggcagactttggaatattggaaaatcctgtt
gggaacatagtttgtccaaacattgcagaacctttgtactccaatgggtcgtccggggat
aaggtcccagccgtcgttgagtttggggcagggagaggatacctaacacaaatacttgca
gactgttacggtatcaagaaagtgtttttagtcgaacggaagtcttacaagctcaaggct
gatcgaagtctacgacaaacagagaacttgactttagagcgtttgagaattgacatagag
gatttgaatttggatgctgttgaatctttgaggggagttccttacctggcgattgggaaa
catctctgtgggcctgcaacagatttgaccttaaggtgttgccttcctaaacaaagtcaa
gaagataaagctacacattcaacttgtagtcgttacctgagaggccttgctattgcgaca
tgttgtcatcatctttgtcaatggaaacactacataaataaaagatattttttaaatctg
gggatcagaaaggatgattttcatgcaatcacgtggtttaccagctgggcagtagatgca
gatcatggctcagatctttctaattcattagaccatggattacacccactttccatctgc
gtgaagaaatattgtggcgttggtgctcagggagttgaagagattgtgaaaaatatggag
gcgatggacagggcagtgttgggtttgatgtgcaaggagatcattgacatggggcggata
atgtggcttaaggagcagggccttgcaacgaagcttaccaagtatgtaccatccaatatc
tcaccagaaaaccatctacttattgccaagaacagatattgcttgtaa
DBGET
integrated database retrieval system
