Telopea speciosissima (New South Wales waratah): 122661370
Help
Entry
122661370 CDS
T07910
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tss03009
]
122661370
Enzymes [BR:
tss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122661370
Ribosome biogenesis [BR:
tss03009
]
Eukaryotic type
Pre-60S particles
Helicases
122661370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
122661370
NCBI-ProteinID:
XP_043712682
LinkDB
All DBs
Position
5:complement(13538874..13568866)
Genome browser
AA seq
465 aa
AA seq
DB search
MPVSDLRAALSGPPDVLVSTPACISTCMSGDVLQAKSLQDSLSILVLDEADLLLSYGYED
DLKALTPYIPRRCQSLLMSATSSADVEKLKKLVLHNPFILTLPEVGDTKDEIIPKNVQQF
WISCSARDKLLHVLALLKLELVQKKVLIFVNSIDMAFRLRLFLEQFGIRSAVLNGELPQN
SRLHILEEFNAGLFDYLIATDGSQIKEKEEVKSENQVSLRKSKKHLRQKLDSEFGVVRGI
DFKNVYTVINFEMPPTSAGYVHRIGRTGRAYNTGASVSLVSPDEMEIFEEIKSMLGDNES
QDNSSFIAPFPLLTKNAVESLRYRAEDVGKSVTKVAIRESRAQDLRNEILNSEKLKTHFE
ANPKDLDLLKHDKVLSKKEPPQHLRAVPEYLLDPTTQEASKIVKLARAAMGNTKSAHRPG
PKKKFRKSGDPLKTFSAEAPKRSKGNKRKGKDGSDDLKQRKKHSV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtttctgacttgcgtgctgcattgtctgggccacctgatgttctggtctccaca
ccagcttgcatttcaacatgtatgtcaggagacgttcttcaagcaaagtcccttcaggat
tcactttcgatccttgttctggacgaggccgaccttcttttgtcatatggctacgaagat
gatctaaaagcacttactccttatatccctcgacgttgtcaatcacttcttatgtctgca
acctcaagtgctgatgttgagaagttaaagaagcttgttctacacaatccgttcattttg
actctgccagaagttggagatactaaggatgagattatccctaaaaatgttcagcaattt
tggatttcatgcagtgctcgtgacaaactacttcacgtccttgctctcttgaaactggaa
cttgttcagaaaaaagttctgatatttgtcaattcaattgacatggctttcaggttgaga
cttttcctagaacagtttggaatcagatctgctgttttaaatggcgagttaccacagaat
tcacgtctccatatccttgaggaattcaatgcgggactttttgattatcttatagcaact
gatggtagccaaataaaagagaaggaagaagtcaagtcagagaatcaagtctcgttacga
aaatctaaaaagcacctcaggcaaaaattagactcagaatttggagtagtgagaggaatt
gacttcaagaatgtttatacggttataaattttgaaatgcccccaacttctgctggatat
gtgcatcgaatagggcgtacaggaagagcatataatactggtgcatcggtctcattggtt
tctccggatgagatggaaatttttgaagagatcaaatctatgttgggagataatgagagc
caagacaattcaagcttcattgcaccatttcctttactcactaagaatgctgtggagtct
ttacgatatagagctgaggatgttggaaaaagtgtaacaaaagttgcaataagagaatca
cgggctcaggatcttaggaatgaaattctaaactctgagaagttgaagactcattttgaa
gctaatccaaaggacttggatctactgaagcatgacaaagtgctgagcaaaaaagaacct
cctcaacacctaagggctgtgcctgaataccttttggacccaacaactcaggaagccagc
aagattgttaagcttgctagagctgcaatgggaaacaccaaatccgctcatcgaccggga
ccaaagaaaaaattcaggaaaagtggagatcctctcaagaccttttctgccgaggcacca
aagagatccaaagggaataagaggaagggaaaagatgggagcgatgaccttaagcagagg
aagaaacattctgtctga
DBGET
integrated database retrieval system
