Telopea speciosissima (New South Wales waratah): 122661523
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Entry
122661523 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122661523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122661523
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122661523
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
HECT type E3
122661523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
HEAT_EZ
Arm
Motif
Other DBs
NCBI-GeneID:
122661523
NCBI-ProteinID:
XP_043712874
LinkDB
All DBs
Position
5:complement(17644692..17660351)
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AA seq
1917 aa
AA seq
DB search
METRSRKRAEASSAAPSSQPTTRSSKRARVSASSSSVPSVSTISTRSRQNSRSQESVVAV
TPMDSTTESSGSAARRESGGRRGKNQVLEREKDSSDKGKEKEAEIRVRERDREREAERSL
GLSIDGGGGGGGGVDDDIDSEGGVGILHQNLTSASSALQGLLRKLGAGLDDLLPSSAVAA
ASSSHQSGRLKKILAGLRSDGEEGRQVEALTQLCELLSIGTEESLSTFSVDSFVPVLVGL
LNNEDNADIMLLAARALTHLCDVLPSSCAAVVHYGAVSCFCARLLTIEYMDLAEQSLQAL
KKISQEHPTACLRAGALMAVLSFLDFFSTGVQRLALSTAANMCKKLPSDASDYVMEAVPL
LTNLLQYHDSKVLEHASVCLTRIAEAFASSPEKLDQLCNHGLVAQAASLISIGNSGGGQA
SLSTPTYTGLIRLLSTCASGSLLGAKTLLLLGISGVLKDILSGSGLVASISVSPALTRPP
EQIFEIVSLADELLPPLPQGTISLPTCSSFLVKGSIGKKSPASSSGKQEDTNGTVPEVSP
REKLLQDQPELLQQFGMDLLPVLIQIYGSSVNGTVRHKCLSVIGKLMYFSTADMIQSLLS
VTNISSFLAGVLAWKDPQVLIPALQIAEILMDKLPGTFSKMFVREGVVHAVDTLIITDSS
TSVAAQASSVDKDNDSTPGTSSRSRRYRRRSGSSNPDGNSLEESKSVVPGSVGSPPTSVE
IPTVNSSLRMAVSACAKAFKDKYFCADPEAAEVGVTDDLLRLKNLCMKLNAGVDDQKTKA
KGKTKASGSRLPDLSANTEDYFIGVISEMLAELNKGDGVSTFEFIGSGVVAALLNYFSCG
TFSKERVSEANLQKLRQQALRRFKSFIAVALPAGQAVVNDESGAPMSVLVQKLQNALSSL
ERFPVVLSHSSRSSTGSSRLSSGLSALSQPFKLRLCRAQGEKSLRDYSSNVVLIDPLASL
AAVEEFLWPRVQRGESGQKPSPSSGNSEPGNTPTGTGATSPSTSGPASSTRRHSTRSRSS
VTIGGAARKDAQQEGTAISSKGKGKAVLKSALDETRGPQTRNASRRRAASEKDAQMKPTH
GGDSSSEEEELDISPVEIDDALVIEEDDISEDEYDDHEEVLRDDSLPACMPDKVHDVKLG
DSAEDGNAAPTTSDSQTNPSSGSSNRATTVRGIDSADFRSGSAFGSKGGMSFAAAAMAGL
ASASGRGIRGGRDRRGFSLAGGLNDPAKLTFTAGGKQLNRHLTIYQAIQRQLVLNEDDDE
RYTGADFLPNDGSKLWNDIYTITYQKADSQIDRTSTGGSTSTTSKSSKVGSASNSNSDTS
GHQTSLLDTILQGELPCDLEKTNSTYNILALLRVLEGLNQLAPRLRVMAVSDDFSVGKIS
SLDELNTTGGKVPSEEFINSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFET
RRQYFYSTAFGLSRALHRLQQQQGADSHGSTNEREVRVGRLQRQKVRVSRNRILDSAAKV
MEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKASLGMWRSNSLSGKHTMEVDG
DSQKTSKTEETSDMKKLGLDSTVEGRDLVQAPLGLFPRPWPSNAEASNGSQFSKVIEYFR
LVGRVMAKALQDGRLLDLPLSTAFYKLVLGQELDLHDILSFDAEFGKILQELQALVSRKR
YLEAMGGNHQNAIAELLFHGAPIEDLCLDFTLPAYPDYVLKPGAENEMVNINNLEEYISL
VVNATVKTGIMRQKEAFRAGFNQVFHISSLQIFSPSELDYLLCGRRELWEAETLVDHIKF
DHGYTSRSPAIVNLLEIMGEFTPEQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSST
MNTALNGTGSSESVDDDLPSVMTCANYLKLPPYSTKEIMYKKLLYAVSEGQGSFDLS
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcggagtcgtaagcgggcggaggcctcctcagcagccccttcatctcaaccc
actacccgttcgagtaagagagcccgtgtttctgcatcctcatcatctgttccctctgtt
tcgacaatatctactcgttcccgccagaattcacgttctcaagaatcagttgtagcggtt
actcccatggattccaccactgaatcatctggctctgctgcccgccgtgaatctggaggt
cggcgtggaaaaaatcaggttttggagagggagaaggactcttctgataagggtaaagag
aaggaggccgaaattagggttagggagagggatagagagagagaagccgaaaggagctta
gggttgagtattgacggtggtggcggtggcggtggcggggttgatgatgacattgacagc
gagggcggggtaggaattctgcatcagaacctgacatccgcaagcagtgccctccaaggg
ctgctccggaaactcggtgctggtctggacgatctactgccatcttccgcagtggcagcg
gcctcctcctctcaccagagtgggcgactgaagaagatattagctgggttgcgatcggat
ggggaagaagggcgtcaggtggaggccctaacacagctctgtgagttgctctctattgga
accgaggaatcacttagcacattttcagttgactcgtttgtgcccgtgctcgtgggactg
cttaataatgaggacaatgctgatatcatgctgctcgctgccagggcactcacccatcta
tgtgatgtgcttccctcgtcctgtgctgctgtcgttcactatggtgcagtttcgtgcttc
tgtgcacggctgctcaccatcgagtacatggacttggcagaacagtctctgcaagctctt
aagaagatttctcaagaacatccaacggcctgtttgcgagctggtgcacttatggctgtg
ttgtcatttcttgacttcttctccactggagtccagcgacttgcgttgtccactgctgcc
aatatgtgtaagaaactcccttcagatgcatctgactatgtgatggaagctgttcctctg
ctcactaaccttcttcagtatcatgattcaaaggttttggagcatgcttctgtttgcttg
actcgaattgctgaggcatttgcatcttctcctgagaagttagatcaactctgtaatcat
ggattggttgcacaggctgcctcccttatttccatcggcaattctgggggtggtcaggca
tccttaagcacacctacttacacgggtttaattcggcttctttcaacatgtgcaagtgga
tcccttttgggggcaaaaacactcctcctccttgggatcagtggtgtattaaaagatatt
ctttcaggttctggcttagttgcgagcatttctgtttcacctgcgttaactagaccgcca
gagcagatttttgagatcgtcagccttgcggatgagcttctcccgccactgccacaaggg
acaatttcccttccgacctgctctagttttctagtgaaaggatccattggaaagaagtct
cctgccagcagttctgggaaacaggaagacacaaatggaactgttcctgaggtttctcct
cgtgaaaagctattgcaagatcaacctgagcttctacagcaatttggaatggatcttctt
cctgttttaatacagatatatggatccagtgtcaatggtacagttcgccacaaatgtctt
tcagttattgggaaattgatgtatttcagtacagcagatatgattcagtctttactgagt
gtaactaatatatcaagtttcttagctggtgttttagcttggaaagatccgcaagtcttg
attcctgccctccagatagcggagattcttatggataaactccctggaactttctcaaag
atgtttgttagagaaggggtggtacatgctgtagacacacttataataactgattcatca
acttcagttgctgcccaagcatcttcagttgataaggataatgactccacacctggtaca
tcatcacgctctaggcgttatcgacgacgcagcggcagctcaaatccagatggaaattct
ttggaagagtcaaaaagcgttgtacctggaagtgtcggctctccccctacttcagtagaa
attccaactgttaattctagccttcgcatggctgtcagtgcatgtgcaaaagcttttaag
gataaatatttttgtgcagaccctgaagcagctgaagttggagtgactgatgatcttctt
cgtttgaagaatctttgcatgaagttgaatgctggtgttgatgatcagaaaaccaaagct
aagggaaaaacaaaagcttctgggtctcgtctgcctgatctttctgctaacactgaagac
tactttattggagtgatatctgagatgctggctgaactgaacaaaggagatggtgtatcc
acatttgagttcattggtagtggggttgttgcagctctgctgaattacttttcttgtgga
acattttccaaggagagagtgtccgaagctaacctacagaagcttcggcaacaagcactt
aggagatttaagtcattcattgcggttgccctccctgctggtcaggctgttgttaatgat
gagagtggagctcctatgagtgtcttggttcagaaattgcaaaatgctttatcctcctta
gagcggtttccagttgttctgagccattcatctaggtcatccactggaagttcacgtctt
tcctctggactcagtgcattgtctcaaccctttaagctgcgcctatgcagagctcaggga
gaaaaatctcttcgtgattattcttctaatgttgtacttattgatcctttggcaagttta
gcagcagttgaagaatttctttggccaagagttcagcggggtgaatctggtcagaagcct
tcaccttcctcgggaaactctgagcctgggaatacacccactgggactggtgctacatct
ccgtccacctctggccctgcttcttccacacgtcgtcattcaactagatctagatcatca
gttaccataggaggggccgctagaaaggatgctcaacaagagggaactgcaatttcttca
aaagggaagggtaaagctgttcttaaatcagctctagatgagacaagaggacctcagaca
agaaatgcttctcgtagaagagcagcttcagaaaaagatgcacaaatgaaaccaacgcat
ggaggggactctagctctgaggaagaggagttggatatctctccagttgagattgatgat
gcattggtgattgaagaggatgatatctcagaggatgaatatgatgaccatgaagaggtg
ctgagagatgattctcttcccgcttgcatgcctgacaaggtccatgatgtgaaattggga
gattcagctgaagatggtaatgctgcccctacaacaagtgatagccagactaatccttcc
tctggttcaagcaatagagctacaaccgtccgaggcatagactctgctgattttagaagt
ggaagcgcgtttggttcgaagggtggaatgtcatttgctgcagctgccatggctgggctt
gcttcagctagtggtaggggtatcaggggtggccgagatcgccggggattttctctagcg
ggtggtttgaatgatccagccaagttaacatttacagcgggtggaaagcaacttaatagg
cacttgactatatatcaggcaatccaacgccagcttgtgctcaatgaggatgatgatgaa
aggtatactggtgctgattttcttcctaatgatggaagcaagctgtggaatgatatttat
accatcacataccagaaggcagacagccaaattgataggacttcaacaggaggttccact
tccactacatcaaaatcttccaaagttggttcagcttccaactctaactctgatacttcg
gggcatcaaacctcccttcttgataccatcttgcaaggagagcttccatgtgatcttgag
aaaaccaactctacctataacattttggcattgttgcgtgtgttggagggtctgaatcag
ttagcacctcgtttgcgagtcatggcagtttcagatgacttctcagtggggaagatttca
agtctagatgagcttaatacaactggtggcaaggtaccatctgaagaatttatcaatagc
aagctcactccaaaattggctcggcagatccaggatgcccttgcattatgtagtggcagt
cttccttcatggtgttaccagctaacaaaagcatgcccattcttgtttccttttgagaca
aggaggcagtacttctattcaactgcttttggattgtctcgggcattgcaccgcctgcag
cagcaacagggtgcagatagtcatggctcaacaaatgaaagggaggtccgtgttgggaga
ttacagcgtcaaaaggtccgtgtctccagaaaccgtattttggattccgcagctaaagtt
atggagatgtattccagtcaaaaggctgttctagaagtagagtattttggtgaggttggc
acgggattgggtcctaccctagagttttatacccttttgagtcatgacctgcaaaaggct
agtctgggcatgtggaggtcaaattcattgtcaggaaaacacacaatggaagtcgatgga
gacagccagaaaaccagtaaaactgaagagacttcagacatgaagaaacttgggctagac
tctactgtagaaggcagagatttagtccaagctcctcttggattgttccctcggccatgg
ccatcaaatgcagaagcttctaatggtagccagttttcgaaagtgatcgaatatttccgg
cttgttggacgagtgatggcaaaagctcttcaagatggccggcttttggatcttccactg
tcgacggccttttataagcttgttcttggtcaagagcttgatttgcatgacattctttca
tttgatgctgaatttggaaagatcctgcaagaattacaagcccttgtttcccggaagcgg
tatctggaggcaatgggtggtaatcatcaaaatgcaattgctgagttactcttccatggt
gctcctattgaagatctctgcctggatttcactcttcctgcctatcctgattatgtttta
aaacctggagcagaaaatgaaatggtgaatattaataacttggaggaatatatttctttg
gtcgttaatgcgactgtgaagacaggaattatgaggcaaaaggaagcattcagagcaggg
ttcaaccaggtcttccacatctcatctttgcaaatattttctcctagtgagctagactac
ttgctctgcgggcgtagagaattatgggaggctgagacgctggttgaccatataaaattc
gatcatggatacacttccaggagccctgcaattgttaatttgctagagatcatgggagaa
tttacacctgagcagcagcgtgcgttctgccagtttgtaactggtgctccaaggctccca
cctggtggtctggctgtgctgaatccaaagctgaccatcgtgagaaagcattcttcaacc
atgaacacagcattaaacgggactggttcttctgaatcagtggatgatgatcttcccagt
gttatgacatgtgctaattacctcaagcttcctccctattctaccaaggaaattatgtac
aagaaactactatatgccgtcagcgaaggccaaggttctttcgacttgtcctga
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