Telopea speciosissima (New South Wales waratah): 122661524
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Entry
122661524 CDS
T07910
Name
(RefSeq) ABC transporter B family member 13-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122661524
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tss02000
]
122661524
04147 Exosome [BR:
tss04147
]
122661524
04090 CD molecules [BR:
tss04090
]
122661524
Enzymes [BR:
tss01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122661524
Transporters [BR:
tss02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122661524
Exosome [BR:
tss04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122661524
CD molecules [BR:
tss04090
]
Proteins
122661524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_29
AAA_22
ABC_ATPase
AAA_16
DUF87
RsgA_GTPase
AAA_23
AAA_15
nSTAND1
AAA_30
G-alpha
Motif
Other DBs
NCBI-GeneID:
122661524
NCBI-ProteinID:
XP_043712876
LinkDB
All DBs
Position
5:complement(17670965..17677738)
Genome browser
AA seq
1256 aa
AA seq
DB search
MEEVELFSMRSPYEKPQENSDPKLSSETKPKVSFLGLFALADTTDYLLMFFGSVGACIHG
AALPIFFVLFGRLIHSLGSLTVNPHRFSSEVSQHALQLVYLGFVVLVSAWMGVAFWMQTG
ERQTARLRLKYLQSVLRRDINFFDTEARDANILYRISSDVILVQDAIGDKICHSLRYVAQ
FVVGFVVGFTSVWQISLLTLAVVPLIAVAGGAYTIIMSTISKKSEEAYAKAGKIAEEVIS
QIRTVYSFVGEDKAIETYSSSLSNALKLGNKSGIAKGFGVGFTYGLLFCAWALLLWYASI
LVRHRDTNGGKAFTTIINVIFSGFALGQAAPNLGAIAKGRAAASNIMSMIKRDISSSKGF
DDGIILSEISGQIDFCEVSFAYPSRPNMVFEALSFSFSAGKTFAIVGQSGSGKSTIISMI
ERFYEPTSGKILLDGHDLKSLQLKWLRKQMGLVSQEPALFATTIGGNILYGREDANMEQI
IEAAKAANAHSFIQELPDGYQTQVGEGGIQLSGGQKQRIAIARAVVRNPKILLLDEATSA
LDSESEFIVQQALDRIMSDRTTIIVAHRLSTIRDVNTIIVMKNGQVVESGSHLELMSKGG
DGEYANLVSLQMSESVKYPNQESSIKPPKTSTYLEVPTLQNHDQNIKSIDRGDLNTEKEP
SGQPILVTTPSLWKLVRLNAPEWPFAILGSVGAILAGMEAPLFALGVTHVLGAFYSHDDL
QIKHEVQQVALAFVGVAALTVPIYLLQHYYYTLMGEQLTSRVRLLMFTAILTNEIGWFDL
DENSTGSLASNLAADATLVRGALADRLSTIIQNVALTVTAFTIAFVFSWRMASVIIATFP
LLIGASIAEQLFLKGFGGNYAHAYSKASAVASEAITNIRTVAALGAEDRILARFAHELHQ
PNKQALLRGHISGMGYGVSQFFAFCSYALGLWYASILIKHRDSNFGDIIKSFMVLIVTAL
AVAETLALTPDIVKGSQALGSVFGILERRTAIDPNNPASEVVMQINGHIEFRNVSFRYPT
RPDVVIFENLNLQVLTGSSLAIVGQSGSGKSSVIALILRFYDPSSGAILIDGRDIRNLNL
RSFRLKIGLVQQEPALFSTTIYENIRYGKDDASEIDIMKAARAANAHGFISRMPDGYQTQ
VGQRGIQLSGGQKQRVAIARAILKDPAILLLDEATSALDTASERLVQEALDNLMNGRTTV
VVAHRLSTIRDADSIAVLQHGRVVESGSHEELIGRPSSMYRQLINLQQETRAEDLG
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagtagagctcttctcaatgaggtctccctacgagaagccgcaggagaattca
gacccaaaactgagctctgaaaccaaaccgaaagtttcattcttgggtctcttcgctctc
gcagataccaccgactatttgttgatgttcttcggaagtgttggagcatgtatccatggt
gctgcacttcctatcttctttgttctcttcggtcgtctcatccactctttgggctccctt
acagtaaatcctcatagattctcttctgaggtttcgcagcacgctctgcagttggtttat
ttaggatttgtagtcctggtttcggcatggatgggagtcgcattttggatgcaaactggg
gagagacagacagcccgtctgagattgaagtatcttcaatcagtcttgagacgagatatt
aacttttttgacacagaagctagggatgcaaatatcctttaccgtatctcaagtgatgta
atactggtgcaggatgcaataggtgataagatatgccatagcttgcgctacgtcgcccaa
tttgttgttggatttgtcgtagggtttacatcagtttggcagatttctcttcttaccctt
gctgtcgttcccttgatagcagtcgcaggtggagcatatacaataattatgtctaccatt
tcaaaaaagagtgaggaagcttatgctaaagcagggaagattgcagaagaggtaatttca
cagatccgtactgtgtactcatttgtgggggaggataaagcaatcgaaacatactccagt
tcacttagcaatgctctcaaattggggaacaagagtggaattgcaaaaggatttggcgtt
ggttttacatatggcctgttattttgtgcttgggcattacttctctggtatgctagcatc
ctcgtccggcaccgagataccaatggtggtaaagcatttacaacaattatcaatgttatc
ttcagtggatttgctctaggccaggctgctccaaaccttggtgctattgcaaaaggacgg
gccgctgcaagcaatataatgagtatgattaaaagagatattagttcttctaaaggtttc
gatgatggaataattttatcagaaatatccgggcaaattgatttctgtgaggtctcattt
gcctacccttcacgaccaaatatggtctttgaagctctgagcttttcctttagtgctggg
aagacattcgcaatagttggtcaaagtgggtcaggaaagagcaccattatatcaatgata
gaacgattctatgaacccacgtcagggaaaatattgctggatgggcatgacctgaagagt
ctccaactaaagtggctgcggaaacagatgggactggttagccaggaaccagcactattt
gcaacaacaataggtgggaacattctatatggtagagaagatgcaaacatggagcagatc
atagaagctgccaaggccgcaaatgcccattcttttatacaggaactacctgatggttat
cagacgcaggtgggagaggggggaattcagctatctggtggacagaaacaaagaatcgcc
attgcaagagcagtagtgagaaacccaaagattctacttctggatgaagctacaagtgct
cttgattcagaatcggagttcattgtacaacaggcacttgataggattatgtcagatcgc
acaacaattattgttgcacatagattgtccacgattcgagatgttaatacaattattgtc
atgaagaatggacaggttgttgaaagtggttcacatttagaattgatgtcgaagggtgga
gatggagagtatgccaatcttgtgagcctgcagatgtcagaaagcgtcaaatatccaaac
caggaaagttctattaaacctcccaaaacttcaacatatttagaagttcccacccttcag
aatcatgatcaaaacattaaatcaattgacagaggtgatctaaatacagaaaaagaaccc
tcaggccaacctatccttgtcacaacaccgtcactttggaaactagttagattgaatgct
cctgagtggccatttgcaatactgggttcagtgggtgccattctggccggcatggaagct
cctctgtttgctcttggagtcacacatgtattgggtgcattttattctcatgatgactta
caaatcaagcatgaggtccagcaagttgctctcgcatttgttggagtagctgctcttaca
gttcctatatatctgctgcaacactactactatactttgatgggagagcagttaacttct
cgggttcggctcttaatgtttacagctatccttacaaatgagattggctggtttgatttg
gacgaaaacagcactggttccctggcctcaaatttggcagcagatgcgactttagtaaga
ggtgcacttgctgaccgcctctcaaccatcatccagaatgtggcactcactgtgacagca
tttactattgcatttgtgttcagttggcggatggcatctgttatcatcgctaccttccct
ttactaattggagcctccatagctgagcaactatttctaaagggatttggaggcaattat
gcgcatgcatactccaaagcatctgctgtggccagtgaagcaatcaccaacatccgtact
gtggctgcgcttggtgctgaggaccggatcttagcccgcttcgcccatgaactacaccaa
ccaaacaagcaagcccttttacgtgggcatatctccggcatgggttatggtgtgtcacaa
ttctttgcattctgttcatatgcactcggcctttggtatgcatcgattctcatcaagcac
agagattcaaattttggagatatcatcaagtcctttatggtgttgatagtcactgctttg
gcggtggcagagacacttgcccttacacctgacattgtaaagggatcgcaggcgcttggg
tcggtctttggtattctggaaagaagaacagccatagaccctaacaacccagcatcagaa
gtggtaatgcaaatcaatggacacatagaattcaggaatgttagcttcaggtaccccaca
aggcctgatgttgtcatctttgagaacttgaatttacaagtgcttacagggagcagtctt
gcaattgtgggacaaagtggatcagggaagagctctgtgattgcacttatattgaggttc
tatgaccccagttcaggggcaattctaatagatgggcgtgatattaggaatctaaacttg
agatcattcaggctaaagataggtttagttcaacaggagccagcattgttctctactaca
atctatgagaacattaggtatggaaaggatgatgcatctgaaatcgacataatgaaggca
gccagagcagcaaatgcacatgggttcataagtagaatgcctgatgggtaccagacccag
gtggggcagcgtggaatacagctatcaggaggacagaaacagagagtggcaattgcaaga
gcaatattaaaagatcctgcaattctccttttggatgaggccactagtgcgttggatacg
gcctcagagaggcttgttcaagaggctcttgataatttaatgaatggtcggactacagtt
gtggtggcacacaggttatcgactatccgtgatgcagacagtattgctgtgcttcaacat
gggagggtggttgagtctggaagtcatgaggagctcattggtagaccaagtagtatgtat
aggcaactaattaatcttcaacaagaaaccagagctgaagatcttggttga
DBGET
integrated database retrieval system
