Telopea speciosissima (New South Wales waratah): 122661608
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Entry
122661608 CDS
T07910
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122661608
Membrane trafficking [BR:
tss04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
122661608
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_C
TRAPPC9-Trs120
Arrestin_C
Motif
Other DBs
NCBI-GeneID:
122661608
NCBI-ProteinID:
XP_043712996
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Position
5:40692516..40785155
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AA seq
1313 aa
AA seq
DB search
MVDPASSFLGKMLLEEITPVVMVLRTPLVEEACLKNGLTFVQMLQPFCVFNNIDVPVRTV
SDQPYRLHKFKLRLFYASDIKQPNMEAAEEHLKQVVTHAAEKGLSDLHTDPPQLDDLLAM
NSELLPLWFKIFNKELIQTLSFSEQEAFDHPVACLLVVSSKDEQPINKFVDLFNTNQLPS
LLNDGVMDPKILKHYLLIHDNQDDSSEKATNVLTEMRSTFGINDSRLLCINSAKDGSEER
IGSLWTPYKTDASPSQDLGCLLNVNDVSEIKDLMQDLSSKHIIPHMEQKIRVLNQQVSAT
RKGFRNQIRNLWWRKGKEEAPDAHNGPMYTFSSIESQIRVLGDYAFMLRDYELALSNYRL
LSTDYKIDKAWKRYAGVQELMGLTYFMLDQSRKEAENCMENAFSTYLKIGSIGQRNATRC
GLWWVEMLKAKDQYKEAAGVYFRISNEEPSLHAAVMLEQASYCYLFSSPPMLRKFGFHLV
LAGNRYYLSDQRKHAIRTYRSALSVYKGNSWSFIKDHVHFHIGKWYAFLGIFDVAVKHML
EILACSHQSVLTQELFLRDFFQIVEKMGKTFEVFRLQLPVINMSSLKVVFEDHRTYASIA
AVNVRESLWQSLEEDMVPSLPISRTNWLDSQPKYSSRNYKDSNVCVVGEGIKMDIEFKNP
LQIPISVSGVSLICRLSARSEMVEAAELVEKDAQAHPYESASGQNNDAEELRKLTSNWEL
NSGVSPFTLSEVDFSLRGGETTVVQLTVNPKVEGVLKVIGVRWKLSDSVVSYFNFDCDHV
KKKNVRGRKKPMQSSSKNLNFVVIKSLPKLEGCICHLPGKIYAGDTRRLVLELKNQSDLS
VKNMKMKISHPRFVIPGNLEDLNIDFPSCLEKNSNSEHNGVQPNSSKQPNSFLFSFPEDT
AIQGGTTFFWPFWLRAAVPGRISLYLSIYYEMKKLSSEMRYRILRMHYDLEVLPSLDLSF
QISPCPSNLQEFLVRMDVVNRTSQESFQLHQLSSVGYHWEISPLQPGGVICPLQLLIAGQ
ALSCFFKLKNCRKSSSFEGSASSHSLLQGRDVRLGPQGSNKALFNVFSSPLADFHHYERL
HQITSIQGLQGTVDFILISQLPENQADHVPGGQSDLLQLFSHHSCHCSIASTSPVWWLMN
GPRTVHHNFSVSFCEIRLCVTIHNSSEEAVSIRISTVDITSSDGQLSDVAAAAQYPMSSE
NQAGWHDVSLGKDIKVTSDVLGTQSGKGVSSDVMAPFVWAASSSTRVELGPISTIEVPLK
VCVFAPGTYNLSNYSVHWEVKLSGDPVFAGDGTRQLSGRSPGHPYYITALQSP
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atggtggatccggcgagttcatttctcgggaaaatgttgttggaagagatcactccggtg
gttatggttcttcgaactcccctcgttgaagaagcctgtctcaagaacggactcaccttc
gttcagatgctgcaacccttttgtgtcttcaacaacattgatgtacctgtacggacggtg
agcgaccagccctacaggttgcacaagttcaagttgcgattgttttatgcttccgacata
aagcagccgaatatggaggctgcggaagagcatttaaaacaggtggttactcatgctgct
gagaaaggtctttctgatttgcacacagatccacctcaacttgatgatttacttgctatg
aattctgaattgctgccattgtggtttaaaatcttcaacaaggagcttatacagacctta
tctttctcagagcaggaagcctttgaccatcctgtggcttgtcttttggttgtttcttct
aaagatgaacaacctatcaacaaatttgttgacttatttaacaccaatcagttgccctcc
cttctcaatgatggtgtgatggatccaaagattctgaagcattacttgttaattcatgat
aatcaagatgacagttcagagaaggcgactaatgttcttacagaaatgagaagtactttt
ggcatcaatgactctagattgttgtgcattaactctgccaaagatggatcggaagaacga
ataggtagcctgtggactccttataaaactgatgcttctcctagtcaagatcttggttgt
ttgcttaatgtcaatgatgttagtgagataaaggacctcatgcaagatctatcttccaaa
catataattcctcatatggaacagaaaatacgagttctcaatcaacaggtttctgcaaca
cgtaaaggctttagaaatcaaattaggaatttgtggtggagaaaaggaaaagaggaagct
cctgatgcccacaatggccccatgtacacgtttagctccattgaatctcaaataagagtt
ttgggcgactatgctttcatgttgcgagattatgaacttgctttgtcaaattatcgattg
ctttcaacagactacaaaattgacaaagcctggaaacgctatgctggtgttcaggaattg
atgggacttacctactttatgctggatcaatcaaggaaggaagcagagaattgcatggaa
aatgcttttagtacctatttgaaaattgggtcaattggtcagagaaatgctacgaggtgt
gggctttggtgggttgaaatgcttaaggccaaggaccagtataaagaagctgctggtgtc
tatttccgaatttccaatgaggaaccttctttacatgccgcagtaatgcttgagcaggca
tcttactgctacttgttttccagtcctccgatgttgcgtaaatttgggtttcatcttgtt
ctagcgggtaaccgttactatttatctgaccagagaaaacatgcaattcgaacatacaga
agtgctctctctgtttacaagggaaattcatggagcttcatcaaagatcatgttcatttt
catattgggaagtggtatgctttccttgggatatttgatgtggcggtcaagcatatgttg
gaaatcctggcatgtagtcatcagtctgtcttgacacaagagttattcctgagggacttt
tttcaaattgttgagaaaatgggaaagacatttgaggtgttcagacttcagttgcccgtt
atcaacatgtcctcattgaaggttgtatttgaagatcatcggacttatgcatcaattgca
gctgttaatgtcagagaaagcttgtggcagtctttggaagaagatatggtcccttcatta
cctatttctaggacgaattggttggactcacagccaaagtattcttcaagaaattataaa
gattctaatgtctgtgtagtgggagaaggaattaaaatggatattgaattcaaaaaccct
cttcaaatccctatttccgtttctggtgtttcacttatatgccggctctctgcaagatct
gaaatggtggaagctgcagagttagttgagaaagatgcacaggcacatccatatgaatca
gctagtggccaaaataatgatgcagaggaacttagaaaattgaccagcaattgggagctg
aactctggtgtttctccttttactttgtcagaagttgatttttccctgcgaggaggtgag
accactgtggtacagcttactgtcaatcccaaagtggaaggtgtcttgaaagtaattggt
gtgaggtggaagctgtcagactctgtagttagttactttaactttgattgtgatcatgta
aagaaaaaaaatgttagaggacgaaagaaacctatgcaatcttcaagcaagaacctaaat
tttgttgtgatcaagagtttaccgaagctcgagggctgcatttgtcacctacctggaaaa
atttatgcaggtgatacacggcgtcttgttttagaattgaaaaaccaatcagacttatct
gttaagaatatgaagatgaagatcagtcatccaagatttgtaattcctgggaatctggaa
gacttgaacatagactttccatcatgtttagaaaagaattcaaatagtgaacataatggt
gtccagcctaacagttctaaacagcctaacagcttcttattttcatttccagaggataca
gcaattcaagggggaacaactttcttctggcctttttggcttcgagctgctgttcctgga
cggatttccttgtacttgtcaatatattacgaaatgaaaaaattgtcaagtgaaatgaga
tatcgtattttacgcatgcattatgatttggaggtactaccatcattggatttgtcattc
caaatcagcccatgtccatcaaacttgcaagagttccttgtgcgcatggatgttgtcaac
aggaccagtcaagagagtttccagcttcatcagttgtcatctgttggataccattgggag
atttcaccactgcagcctggtggagtcatttgtcccttgcaactgctaattgctggtcaa
gcattatcttgtttctttaagcttaagaattgtaggaaatcatcatcttttgaaggctcc
gcctcttctcatagtcttctccaaggacgtgatgtaagattgggtcctcaaggcagcaac
aaagcattgtttaatgtattcagttcacctttggcagatttccaccattatgaacgattg
caccagataacgtcaattcagggactgcaaggtactgttgattttatcttgatctctcag
ctgcccgaaaatcaagcagatcatgtgccaggaggccagtcggatctcctgcaactattc
tctcatcattcatgtcactgcagtattgcaagcacgagccctgtgtggtggctaatgaat
gggccacggaccgtacatcacaacttctctgtttctttctgtgaaattagactgtgtgtg
accattcacaactcatcagaggaagctgtttctattcggataagcactgtagacatcaca
tccagtgatggccaattaagtgatgtagctgcagcagctcagtatccaatgtcttcggaa
aatcaagcaggatggcatgatgtatctctaggcaaagacattaaagtcacttctgatgtc
cttgggacccaatctggcaagggagtgtcatctgatgtgatggctccctttgtttgggct
gcttcaagttctacccgagttgaacttgggcctatctctaccattgaagtgcctctcaag
gtctgtgtgtttgctcctggaacatataacctttcaaactactcagtgcactgggaagtt
aagctttcaggtgatccagtatttgctggagacgggacaagacaactctccgggaggagt
ccgggtcatccatattatattactgcgctgcagtctccttaa
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