Telopea speciosissima (New South Wales waratah): 122661616
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Entry
122661616 CDS
T07910
Name
(RefSeq) plant-specific TFIIB-related protein 1 isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122661616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122661616
Transcription machinery [BR:
tss03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
122661616
Prokaryotic type
Archaeal type
TFB
122661616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
122661616
NCBI-ProteinID:
XP_043713006
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All DBs
Position
5:9005601..9009121
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AA seq
552 aa
AA seq
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MRCPYCSGAQGRCTITTSGRSVTECCSCGRVVVERQTQAHDLFLLRAQDSPLCLVTSDLS
SLPSPAAVGDTNGDDEDPFQPTGFITAFSTWSLESSPLFARSSLSFAGHLAELERALDSS
SSSSSSSTSSSGPGGVVVVDNLRAYLQIIDVTSKLGLDYDISDHAFQLFRDCSSATCLRN
RSVEALATAALVQAIREAQEPRTLQEISIASNVPQKEIGKYIKILGEALQLSQPINSNSI
AFHMPRFCNLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQ
AEICKVTGLTEVTLRKVYKELLENWDDLLPANYTPAVPPEKAFPTTSITSGRSSAPRTDL
ADVAALLDKDKQAEVTIPNKSAEFSETDHQARGKEETESKGNSRVPNSSSSPYGVGNTER
VLNIATNIWQPQQPPIPLGTPGSRPTGERNQISGRGIDINEAQLSTPDLEEKVDREAKAG
ISSQRPSPFSSPQASSGSSNPWQFHSPSVTRPPLYAQFVQKPQIMPGFPEPKGTGSQKGS
EKADRGGDTERQ
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgcggtgcccctactgctcgggggcgcaaggtcgctgcacaatcaccacgtcagggcgg
tcggtgacggagtgttgctcttgcgggcgagtggtagtggagcgacagacacaggcccac
gatctcttccttctgcgtgctcaagactcccctctctgccttgtcacctctgacctctct
tctctcccttctcccgctgctgtgggcgacaccaacggtgacgacgaagaccctttccag
cccactggcttcatcactgctttctctacatggtctcttgagtccagccctctttttgct
cgctcttccctctccttcgccggtcacctcgctgaactagagcgagccctcgactcgtct
tcctcctcttcttcttcctctacgagctcctccggaccgggtggcgttgtcgttgtcgac
aaccttcgtgcttatctccagatcatcgacgtaacttccaaattgggtctcgattacgat
atctctgatcacgcctttcaactcttccgggactgttcttctgctacttgtttgaggaat
cgcagtgtggaagcacttgccactgctgctctggttcaggctatcagggaggctcaggaa
cctaggacactccaggaaatctcaatcgcctccaatgttccccaaaaggagattggtaaa
tacatcaagatattgggagaagctctgcaacttagtcagcccattaacagcaactccata
gcattccacatgccaaggttttgcaatctcctccaactcaacaagtcagcccaggaactg
gctactcacattggtgaggtggtgatcaacaaatgcttctgcacccggcgcaatccaatt
agcatctctgctgctgcaatttatctggcatgccagctagaagacaaacgcaagacccag
gcagagatctgcaaagtgacaggtctcactgaggtcactctaaggaaagtttacaaggag
ctgctagaaaactgggatgatcttctcccagctaactacactcctgctgtccccccggag
aaagcattccctacaacttcaatcacctcaggccgatcatcagctcctagaacagacctg
gctgatgttgctgccttgttggacaaagataagcaagctgaagttaccatacctaataag
tcagctgagttttcagagacagatcatcaagctagaggcaaagaagagactgaaagtaaa
ggcaattctcgagtacccaattctagttcatcaccttatggagtggggaacacagaacgt
gtgttgaatattgcgacaaacatctggcagccccaacagcccccgattccacttggtaca
cctggttctcggccaacaggtgagaggaatcagatttctggtcgaggtattgatatcaat
gaggctcagcttagcactccagaccttgaggagaaggttgatagagaagctaaggctggt
ataagttctcaaaggccaagcccattttccagtccccaagcctcaagtgggagctctaac
ccatggcagtttcattctccttctgtgacaaggccacctctttatgctcagtttgtgcag
aaacctcagataatgccaggttttccagagcccaaagggactgggagtcaaaagggcagt
gagaaagcagatcggggtggagatactgagagacaatag
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