Telopea speciosissima (New South Wales waratah): 122661630
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Entry
122661630 CDS
T07910
Name
(RefSeq) biotin carboxylase 1, chloroplastic
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00061
Fatty acid biosynthesis
tss00620
Pyruvate metabolism
tss00640
Propanoate metabolism
tss01100
Metabolic pathways
tss01110
Biosynthesis of secondary metabolites
tss01200
Carbon metabolism
tss01212
Fatty acid metabolism
Module
tss_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
122661630
00640 Propanoate metabolism
122661630
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122661630
Enzymes [BR:
tss01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
122661630
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
122661630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
RimK
ATP-grasp_LDMS
ATP-grasp_5
GARS_A
DUF6653
Motif
Other DBs
NCBI-GeneID:
122661630
NCBI-ProteinID:
XP_043713023
LinkDB
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Position
5:28352325..28376824
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AA seq
532 aa
AA seq
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MDAMIVCKSVYSPPGLFVGRAVGIRSSQCSFMVGSPVSFPRQRAQAVHVSRKSKKRGGAL
SATCRDDKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDRDALHVKLADEAVCIGEAPS
NQSYLVIPNVLAAAISRGCTMLHPGYGFLSENAVFVEMCREHGINFIGPNPESIRVMGDK
STARETMKKAGVPTVPGSDGLLQSTDEGIKLANEIGFPVMIKATAGGGGRGMRLAKEPDE
FVKLLQQAKTEAGAAFGNDGVYLEKYVQNPRHIEFQVLADMFGNVVHFGERDCSIQRRNQ
KLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTIEFLLDERGSFYFMEMNTRIQVE
HPITEMISSTDLIEEQIRVARGEKLRYKQEDIVLRGHSIECRINAEDAFKGFRPGPGRVT
AYLPSGGPFVRMDSHLYPDYVVPPSYDSLLGKLIVWAPTRERAIERMKRALDDTVITGVP
TTIDYHKLILDVEDFRNGKVDTAFIPKHEKELAAPQKMVLSTPTKELANTTA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggatgctatgattgtttgcaaatccgtctactcgccacctggcttatttgtggggcga
gctgtaggaatacggagctcacaatgtagctttatggtgggtagcccggttagttttcct
aggcagagagctcaagctgttcatgtgagccggaagtcaaagaaacgtgggggagcacta
agtgctacatgtcgagatgataagattcttgtagccaatagaggagaaattgcagtccgt
gtgattcgaaccgctcatgaaatggggataccttgtgttgcagtctactcaaccatagat
agggatgcacttcatgtgaaacttgcagatgaagcagtttgcattggtgaagcaccaagt
aatcaatcatatttggtgatcccaaatgttcttgctgctgcaattagccgtggatgtaca
atgttgcatcctggatatggcttcctatctgagaatgcagtttttgttgaaatgtgccga
gagcatggaattaactttatcgggcctaatcctgagagcattcgggttatgggggacaaa
tctactgccagagagacaatgaagaaagctggtgttccaactgtaccaggaagtgatgga
ttgttacagagtacagatgaaggtatcaagctcgccaatgagattggttttcctgtgatg
atcaaggcaactgctggtggtggaggacgtggaatgcgtcttgctaaagaacctgatgag
tttgtaaagttgttgcagcaagcaaagaccgaggctggtgctgcgtttggaaatgatgga
gtttatttggaaaaatatgttcaaaatcctaggcacatcgagttccaggttcttgccgat
atgttcggtaatgttgttcactttggagagcgtgattgcagcatccagcgaaggaaccaa
aagttgcttgaagaagctccttcccctgcattgacaccagaattacggaaagccatgggt
gatgcagcagttgcagcagcagcatccataggttacattggtgtgggaaccatagaattc
cttctggacgagaggggttccttctacttcatggaaatgaacactcggattcaggtggaa
catcccatcactgagatgatttcttctactgatttgattgaagaacaaatccgtgtggct
agaggagagaaactccggtacaaacaggaagatattgttctgagaggacattcaattgaa
tgccgtattaatgctgaagatgctttcaaaggattccgaccaggacctgggagagtaaca
gcttacttgccatctggaggcccatttgtgagaatggatagccatctttatcctgattat
gtggttcccccaagctatgattccctacttggaaagcttattgtttgggcgccaacacga
gaaagagcaattgagcgcatgaaaagggctcttgatgacactgtaattacaggggttcct
acaacaattgattaccacaaactcatccttgatgttgaggacttcagaaatggcaaggtt
gatactgcattcattccaaagcatgaaaaagagttagctgcgccccagaagatggtgcta
tcgactcctaccaaagaactggctaacacaactgcttag
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