Telopea speciosissima (New South Wales waratah): 122661648
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Entry
122661648 CDS
T07910
Name
(RefSeq) SAC3 family protein B-like isoform X1
KO
K23719
nuclear mRNA export protein SAC3
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122661648
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
122661648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
INT10
Motif
Other DBs
NCBI-GeneID:
122661648
NCBI-ProteinID:
XP_043713051
LinkDB
All DBs
Position
5:15643188..15655389
Genome browser
AA seq
1384 aa
AA seq
DB search
MKLSMECPIPFKMQIPLLRVLLSRAAVSHPRSSKVNSQTYWRPSPPAQNINVEADGVKST
TFHVPKRTRSPPVPSSDENILGDSSSTQFNTDRELQAKAKRLARFSVELRQPVPNADDLK
KPKSSGNRHDQALVDRRKFVLEHPFEAEGDFSNASILPDSEGLSSSHAIIGLCPDMCPDS
EREERERKGDLDKYERLDGDRNQTTQFLAVKKYNRTAEREADLIRPMPVLQKTVDYLLAL
LGQPHDVRFLGMYNFLWDRMRAIRMDLRMQHIFNRRAITMLEQMIRLHIIAMHELCEYTK
GEGFSEGFDAHLNIEQMNKTSVELFQMYDDHRKKGIDVPTQKEFRGYYALLKLDKHPGYK
VEPAELSLDLAKMTPEIRQAPEVLFAREVARACRTGNFIAFFRLARKATYLQACLMHAHF
SKLRTQAFASLHSGLQNNQGIPITHVRKWLGMEEEDIENLLEYHGFSVKEFEESYMFKEG
PFLNSDSDYPTKCSKLVHLKRSRRILDDVVSPNYVVKLPVKESKQVFPEKTDEIQRKAVQ
FVEMKDSSVVVDEEMPDFESNPTPRDGSAVQSTLKTSTDHHLGNVSFEPLDVPEVLYPEN
PPSMVGRVSSPVSGAYLTDVMRRNMPSSVKEMPLVSRDNTPVSNAFWTDSLEKHMPSSVK
EPPLQILPGDLSQVERYQGSLFDTVLEDSATQEEVIKHLENKESRVYPEELEGEKAIAIQ
QEAEALLAKLKLILRIWKRRSSKQRELREQRKLAADAALNLLSFGPPLRPRKTESNIVGE
LNIDHIVKERHEIQRRLWSRLNVAEVVEGILRERNPDAKCCCWKLLVCFQMNGTGRNGSL
QKSQINHFAGRWLLNKLMGVRKEVDDELLVSLPGVSIWKKWSTRLSRSLPTCCLSVIRDI
EVDKSDDTAAGASSVLFLVSESIPLELQKVKLHNLIMSLPCGSRLPLLILSGMLGEEVHD
PSLRVVNGLGLNDMDETRIKSFSIKFLTKDQSMEHVDEFFSDDKLREGLQWLAGQSPPQP
DLLRLKTRELVLTHLNASLEVLDKMNVSDASANHCISVFNEALDRSAEEVTCAADINPVC
WPCPEMDMLEESSNEHKAVNWFLPSIGWSSTARVEPIKFAINGCKLPLFPDDLSWLDRDL
HTGKEVEDQKLELEKSLTRYLSQSSKMMGWTLAARESNVMVQNGAQLVLHDSCYHIVPRW
VVIFQRVFNWQLMNLSSGIFSVAYVLEHQHEPSLKEHGMVTSQVETPSLEIVDYSRYQED
TLPPCFHSQLSLDEMLEVGYNSLPSWRDQSESERVHHLSVMEDNGSIAVDVTTSSDLMED
VQIPRRDGEFAETDDTCTSVELNYSNSEVVVFNKDKKQADRLSKLLEQCNLVQDMIDEKL
SIYF
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttccatggaatgtcccatcccattcaagatgcaaatcccactattgagagtt
ctcttgtccagggctgccgtatctcatcctagatcaagtaaagttaattcccaaacttac
tggaggccctccccacctgctcagaatatcaatgttgaagctgatggtgtgaagtctacc
acctttcatgtacccaagaggaccaggtcaccccctgtaccttcttctgatgaaaatatt
ctaggagattcatcctctacgcaattcaatactgatagagagctacaagcgaaggcaaag
cgattggcacgcttcagtgttgagctaagacaaccggtgccaaatgctgatgatcttaaa
aagcccaaatcttcagggaatagacatgatcaagctctggtggatagacggaagtttgtt
ctggagcatccctttgaagcagaaggggacttctctaatgccagcattttacctgattct
gaaggcttgtcatcttcccatgctataattgggttatgtcctgatatgtgtccagattca
gaaagggaggagcgtgagaggaaaggagatcttgacaaatatgaacgcttggatggagat
cgaaatcaaactacccaattccttgctgtcaagaagtataataggacagctgagagggaa
gcagacttgattagacccatgcctgtcttgcagaagacggttgattatcttctggctttg
ctaggtcagcctcatgatgttaggtttcttggcatgtataacttcttgtgggacaggatg
agggcgatccggatggacctcaggatgcaacacattttcaatagaagggcaataaccatg
ctggagcaaatgataagacttcacatcatagccatgcatgaactgtgtgaatacacgaaa
ggagagggcttctctgagggatttgatgcacacctcaacattgaacagatgaataaaaca
tcagtagagttgttccaaatgtatgacgatcaccggaagaagggaattgatgtgcccaca
cagaaagaatttcggggttattatgcacttctcaaactggataagcatcctggctacaaa
gttgaacctgcagaactctcacttgatcttgcaaagatgactccagagataaggcaagcc
ccggaagttctatttgcccgtgaggtagcaagggcttgcagaacgggtaattttattgcc
ttcttccgacttgcaaggaaagcgacttaccttcaagcatgcttaatgcatgcacatttt
tcgaagttacgaacccaggcatttgcttctctacacagtggtcttcagaataaccaagga
atacctatcacacatgtcagaaaatggcttgggatggaggaagaggacatagaaaacctc
ctagaataccatggattttcagtgaaggaatttgaagaatcatacatgtttaaggaaggt
ccatttctcaacagcgacagtgattaccctaccaaatgctcaaaacttgttcacctgaaa
agatcgagaaggattcttgatgatgttgtttctcccaattatgtggtgaaattgcctgtg
aaagaatcaaaacaggttttccctgaaaagacggacgagattcaacgcaaagctgtacaa
tttgttgaaatgaaagattcttctgttgttgttgatgaagaaatgcctgattttgaatcc
aatcctactccaagagatggttctgcagtacagtcaacacttaaaacatcaactgaccac
cacttgggcaatgtttctttcgagcctttggatgttcctgaagttctttatcctgagaat
ccaccatctatggttggtagagttagcagtccagtctcaggtgcctatttgactgatgtt
atgagaagaaatatgccttcaagtgtgaaggaaatgcccctggttagtagggataacact
ccagtttctaatgctttttggactgattctctggaaaaacacatgccttccagtgtgaaa
gaaccacccctgcaaattttgccaggggatctttcacaagttgagagatatcaggggtca
ctttttgacactgtgttggaggattcggcaactcaggaagaagtaatcaaacacctagag
aataaagaaagcagggtttatcctgaagaattagaaggcgaaaaagctatagcaattcaa
caggaagctgaagctttgctggcaaaacttaagttgatcctaaggatatggaagcgtcgt
tcctcaaagcaaagggagttacgtgagcaacgaaaattggcagcagacgctgcattaaat
ttattatcatttggcccaccacttcgaccaaggaaaactgaatcaaacattgttggtgag
cttaacattgatcatattgtgaaggagagacatgagatacagaggagattgtggtccagg
ctgaatgttgctgaagtggttgaggggatactgagggaaagaaatccagatgccaagtgc
tgttgctggaaactacttgtctgtttccagatgaatggcacagggaggaatggatcactt
cagaaaagccaaatcaaccattttgctgggcgatggttgctcaacaagcttatgggtgtc
aggaaggaagttgatgatgaactgctagtttccttgccaggcgtatcgatatggaagaag
tggtctactaggctatccagaagccttccaacctgttgtttatctgtcatcagagacatt
gaagttgataaatcagatgatacagcagctggtgcaagttctgttctttttcttgtatca
gaaagcattccattggagcttcaaaaagttaaactccataaccttattatgtccttacct
tgtggttcccgcttgccactgcttatcttaagtggaatgcttggagaagaggttcatgat
ccttctctcagggtagtgaatggactaggactaaatgacatggatgaaacaaggataaag
agcttctcgatcaaattcttaacaaaagaccagtcaatggaacatgttgacgagtttttc
agcgatgacaagttacgagagggcttacaatggctagcgggacagtcaccaccacaacct
gatctccttcgtcttaagacacgtgaactggttttgactcacttgaatgcctcattagag
gttcttgacaagatgaatgtgtctgatgcgagtgcgaaccattgtatatctgtcttcaat
gaagcattggatcgatcagcagaggaggttacttgtgcagctgatatcaatcctgtctgt
tggccctgtcctgagatggatatgcttgaggaatccagcaatgagcataaggctgttaac
tggtttttaccaagcattgggtggagttcaactgcgagagttgagccaattaaatttgca
attaatggttgcaagctaccacttttccctgatgacttgtcttggttagatcgggattta
cacacaggaaaggaggtcgaagatcagaaattagaactagagaaatcccttaccagatat
ctgagtcaatcaagtaagatgatggggtggacactggcagcaagagagtcaaatgtaatg
gttcaaaatggtgctcaattagtgctccatgattcctgctaccatatagttcctagatgg
gtagtgatctttcaacgagttttcaattggcaactaatgaatttaagcagtgggatcttc
tcagtagcttatgtgttggagcaccaacatgaaccctctttgaaagaacacggcatggtt
acttctcaggttgaaactccatcattggaaattgtggattattcaaggtatcaggaggat
acattaccaccatgttttcacagccagctatcacttgatgaaatgcttgaagttggctat
aactcacttccttcttggagggaccaatcagagtccgagcgtgttcatcatctctctgtg
atggaagacaacggtagtatagctgtggatgttaccacttcctctgatttaatggaggat
gttcagatccctcgacgagatggtgaatttgctgagactgacgatacttgtacgtcagtt
gagttaaattacagtaatagcgaagtagtagtttttaataaggataaaaaacaggctgat
agattgagcaagttgttggagcagtgtaaccttgtgcaggacatgattgatgaaaagctc
tctatatatttctaa
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