Telopea speciosissima (New South Wales waratah): 122661684
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Entry
122661684 CDS
T07910
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03015
mRNA surveillance pathway
tss04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122661684
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122661684
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tss01009
]
122661684
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122661684
03036 Chromosome and associated proteins [BR:
tss03036
]
122661684
Protein phosphatases and associated proteins [BR:
tss01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122661684
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122661684
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122661684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_RIG_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
DUF5899
Motif
Other DBs
NCBI-GeneID:
122661684
NCBI-ProteinID:
XP_043713097
LinkDB
All DBs
Position
5:complement(11514542..11552638)
Genome browser
AA seq
503 aa
AA seq
DB search
MITMGNGETRVPPLEWKFSQVFGERAAGEEVQEADIISAIEFDKTGEHLATGDRGGRVVL
FERIDGKGCTLRKDQEKMDYPAARHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKVRWCQ
TANGALFLLSANDKTVKYWKVQEKKIKKICDMNLDSSASARNGELSGPTGAATDFVFPSG
GFPSLHLPVVIVGRETNLVPRCRRIYAHAHDYHINSISNNSDGETFISADDLRINLWNLD
ISNQSFNIVDVKPVNMEDLTEVITSAEFHPTQCNTLAYSSSKGTIRLIDMRQSALCDTHA
KLFVEHETASSRSFFTEIIASISDIKFGKDGRHILSRDYMTLKLWDLNMESGPVATFQVH
DHLRPKLCDLYDSDSIFDKFECCLSGDGLHVATGSYSNHFRVFGCNSGSNEATTLEASKN
PMRHQTQTSSRPIRSLTSLGRSRRRGAENLNVDANGVAYDFSTKLLHLAWHPTSNTLACA
AANSLYIYYAEDAPKNDAAPNQP
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgatcactatggggaatggagaaacacgggttccacctctggagtggaaattctctcag
gtttttggagaacgagcggctggcgaggaagttcaggaagctgacattatctctgccatt
gaatttgataaaactggtgagcatcttgctactggtgaccgtggaggaagggtcgtccta
tttgaaaggatagatggaaaaggctgcactttgcggaaggatcaggagaaaatggattat
cctgctgctaggcatcctgaatttcgatacaagacagaattccaaagtcatgaacctgag
tttgactacctaaagagcttggaaatagaagaaaaaattaataaagtgcggtggtgtcag
actgccaatggtgcacttttccttctttcagccaatgataaaaccgtgaagtattggaag
gttcaggagaagaaaataaagaagatatgtgacatgaatttagattcttcagcatcagca
agaaatggagaactttctggtccaactggagcagcaactgactttgtatttccctctgga
gggttcccgtctcttcatctaccagtggtaattgttggccgtgagacaaaccttgttccc
agatgtcgaagaatatatgctcatgcacatgactaccacattaattccatttcaaacaac
agtgatggcgagacatttatatcagcggatgatttgcgaataaatttgtggaacctggat
ataagtaaccaaagtttcaatattgttgatgtgaagcctgtgaacatggaggatctcact
gaggttataacatctgcagagttccatcctactcaatgcaacacattagcatacagcagt
tcaaagggcacaatacgccttattgacatgcgacagtctgctttatgtgacacacatgcc
aaactatttgtggagcatgagacagctagttcacggtcatttttcacagagataattgcc
tcgatatcagatattaaatttggaaaggacggaagacacatattgagtcgtgattacatg
acgctgaagctatgggatttaaacatggaatctggccctgttgcaaccttccaggtccat
gaccatcttagacccaagttatgtgacctatacgatagtgattccatctttgataaattt
gagtgctgtttaagtggagacggtctccatgttgccactggttcttatagcaaccatttt
cgtgtctttggctgtaattctggcagtaatgaggcaacaacactggaagccagcaaaaat
cctatgagacatcagactcaaacatcttcgaggcccataagatcactcaccagtctagga
cgctctcgtagacgaggagctgagaatctgaatgtagatgcaaatggagtagcatatgac
ttttcaaccaagttgctccacctagcatggcatccaacctccaatactcttgcctgtgcg
gctgcaaatagcctatacatttactatgcagaggatgctcccaaaaacgatgctgctcct
aatcagccatga
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