Telopea speciosissima (New South Wales waratah): 122661744
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Entry
122661744 CDS
T07910
Name
(RefSeq) serine/threonine-protein kinase VPS15-like
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122661744
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tss01001
]
122661744
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122661744
Enzymes [BR:
tss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122661744
Protein kinases [BR:
tss01001
]
Serine/threonine kinases: Other
VPS15 family
122661744
Membrane trafficking [BR:
tss04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122661744
Autophagy
Autophagosome formation proteins
PI3K complex
122661744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
WD40
HEAT
PK_Tyr_Ser-Thr
NBCH_WD40
HEAT_EZ
Cohesin_HEAT
Cnd1
TCAD9
APH
Motif
Other DBs
NCBI-GeneID:
122661744
NCBI-ProteinID:
XP_043713179
LinkDB
All DBs
Position
5:48345515..48380956
Genome browser
AA seq
1560 aa
AA seq
DB search
MGNKIARTTQVSASEYYLHDLPSSYNVVLKEVLGRGRFLKSIQCKHDEGLVLVKVYFKRG
DSIDLKEYERRLFQIKETFRSIQNSHVWPFQYWLETDKAAYLLRQYFFNNIHDRLSTRPF
LSLIEKKWLAFQLLYAVKQSHENGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPDDD
PSDFSFFFDTGGRRRCYLAPERFYEHGGETQAAPDAPLRPSMDIFSVGCVIAELFLEGQP
LFELSQLLAYRRGQYDPNQLLEKIQDSGIRKMILHMIQLEPESRLSADSYLQNYAAVVFP
NYFSPFLHNFFSCLIPLDSDTRIAVTQSAFHEIHRQMMKNKESEEIGSVSCKSSNTTTDG
TPRKIGNARQCLNSSEELLKKKEPDKGLLNDQLQLLGDINALLRDVEQSNHCFNSELTSE
NSPTVSSGNSDAINSVTPQKPTNGQKESPGELLQTSCNGFKGRDHPLFRKIIKSDLTALM
SEYDNRLDTFGMPSFTTTQHNMSCEGMVLIAALLCSCIRSVRLPQLRRGAVLLLKSSSLY
IDDEDRLQRVVPYVIAMLSDTAAIVRCAALETLCCILPLVQEFPPSDAKIFPEYILPMLS
MLPDDPEESVRICYASNISKIALTAYRFLIQSLSLSEAGVLDKLSTTPKSSVPSSGQLQT
ERTNAQLSQLRVSIAEVIQELVMGPKQTPNIRRALLYDIGNLCCFFGQRQSNDFVLPILP
AFLNDRDEQLRAVFYGQIVFVCFFVGQRSVEEYLLPYIEQALSDAVQAVIVNALECLAML
CNNGFLRKRILLEMIERALPLLCYPSQWVRRSVVTFIAASSECLGAVDSYVYLAPIIRPF
LQRQPASLASEKPLLSCLKPPVSRQVFYQVLENARSSDMLERQRKIWYNSSAQSNQWETV
ENKRGVGQLNPIKSWSGKPPDLQGHKPASSAMQQVGIFDGDDGDAKLRAMGSFMPNASST
MDIRDPRSSEKMQFSGFISPHVSGGSSSVGDGSSEGIPLYSYNMDKRATGVAPAGSDSAS
QWNSFGIGSSSMPWVDSLNKSFSLANSSVAPKLVSGSLSISNGSKQFYKALREAEGREND
QTVYITNKFQDIGVSGLLKGSSINVEDVPSPSDATGLTSFARASSLPDSGWRPRGVLVAH
LQEHRSAVNDITISSDHSFFVSASDDSTVKVWDTRKLEKDTSFRSRLTYSLDGSRALCAT
MLRGSAQVVVGACDGMIHMFSVDHISRGLGSVVEKYSGIADIKKREVGEGAILSLLNYTM
DGCPSQTIMYSTQSCGIHLWDTRTNSMSWTLKSVPEEGYVSSLVTGPCGNWFVSGSSRGV
LTLWDQRFLLPVNTWQYSLVCPIEKMSLLVPPPNAPRSTAGRPLVYVAAGSNEVALWNAE
NGSCHQVLRLSNSESDAESSGLPWALARPPKKSSSKQDMKRNVNPKYRVDELNEPPARLP
GIRSMLPLPGGDLLTGGTDLKIRRWDHCSPDRSYCVCGPSLKGVGNDEFYETRSSFGVQI
VQETSRRPPATKLTTKALLAAAATDSAGCHRDSVLSLASVKLNQRLLISGSRDGAIKVWK
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacaagattgcacgcacaacacaggtttcggcatcagagtactaccttcatgac
cttccatcatcgtataacgttgttctcaaggaggttctgggtcgaggtagattccttaaa
tcaattcagtgcaagcacgacgaggggcttgtcctcgtcaaggtctacttcaagcgtgga
gactccattgatctcaaagaatatgagcgtcgcttgtttcaaatcaaagagacctttcgt
tctattcagaactctcatgtatggccgttccagtattggcttgaaaccgataaagcggct
tatttattgaggcaatatttcttcaataacattcatgatcggttgagtactcgacccttt
cttagtttgattgagaagaagtggttggctttccagttattatatgctgtgaagcaaagc
cacgagaatggtgtttgtcatggtgatattaagtgtgagaatgttctggtcacttcttgg
aattggctttaccttgctgactttgcttcgtttaagcccacttacatacctgatgatgac
ccctctgatttctctttcttctttgatactggagggagaaggcgttgttatcttgctcca
gagagattttatgagcatggaggtgagacacaagctgcaccagatgcacctttaagacca
tctatggacatcttctctgtagggtgtgtgattgcggagctttttcttgagggacagcca
ttgtttgaattatctcagctacttgcttataggagaggacaatatgatcctaaccagctt
cttgaaaagatccaggattctggcatccgcaagatgattcttcatatgattcagttggaa
ccagagtcccggctttctgctgatagctacttgcagaattatgctgctgttgtgttccca
aactacttctcaccatttctccataatttcttttcctgcttgattccccttgattctgat
accaggattgcagtgacacagagtgccttccatgagatacataggcaaatgatgaagaac
aaggaaagtgaggagattggttctgtatcatgtaagtcttcaaataccacaactgatggg
actccccggaagataggcaatgcaagacagtgcttgaattcatcagaggagctcttgaag
aagaaagagccggataaaggactgttgaatgatcagcttcagcttcttggtgatatcaat
gcactccttagggatgtagaacagagtaatcactgctttaattctgagctgacttctgaa
aattcccctactgtttcttcgggaaactctgatgcaataaattctgtaactcctcaaaaa
ccaacgaacggccagaaggaatctccaggggagctcttgcaaacttcttgtaatgggttt
aagggcagggatcacccccttttcagaaagattataaagagtgacttgactgcattgatg
tctgaatatgacaaccgattggatacttttgggatgccttcctttacaacaacccaacat
aatatgagctgtgaaggaatggtgttgattgctgcactgctatgttcctgcatacgtagt
gtcaggttgccacagttgagaaggggggctgtactacttctgaagtcttcttccttatat
attgatgatgaagaccgcttgcagcgtgtcgttccatatgttattgcgatgctttctgat
acagctgcaattgtgcgttgtgccgctctggaaactttgtgttgcattctgccattagtc
caagaattccctcctagtgatgcaaagatttttcctgaatacattcttccaatgctatct
atgcttccagatgatccagaagaaagtgtacggatttgttatgccagcaatatctccaag
atcgcactaactgcttatcgttttctaattcaatcattaagcttgagtgaggcaggagtt
cttgataaactcagcacaaccccaaaatcatcagttccatcatctggacagctgcagact
gagagaactaatgcacagctttctcagttgagggtgtcaatagccgaggtgattcaagaa
cttgttatgggcccaaagcaaactccaaatatcaggagagcactcctatatgacattggt
aacctttgttgcttttttggtcagcggcagagtaatgactttgtgttaccaatcctccca
gcttttctaaatgatcgagatgaacagctgagggcagttttctacggccaaattgtgttt
gtctgcttctttgtgggtcaaagaagtgttgaggagtatctcttaccttatattgagcaa
gccttaagtgatgcagtgcaggctgttattgttaatgcattggaatgcttagccatgctg
tgcaataatggtttcttgaggaagaggatattgcttgaaatgattgaacgtgctttgcca
ttactatgctatccaagtcagtgggtaaggagatcggttgtcactttcattgcagctagc
agtgagtgtttgggtgcagtggactcctatgtttacctagctccaattatacgccctttc
ctccaaagacagcccgcatctctagcttcagaaaagcctcttctttcatgtctcaagcct
cctgtttcaagacaggtattttaccaagtcttagaaaatgccaggagttcggacatgcta
gagagacagagaaaaatatggtacaattcatctgcacagtcaaaccaatgggaaacagta
gagaacaagaggggagtgggacagttaaatcccattaagagctggtcaggcaagccaccc
gatttgcagggtcataaacctgccagcagtgccatgcagcaagttgggatatttgatggt
gatgatggtgatgctaaattaagggcaatgggaagcttcatgccaaacgcttcaagcaca
atggatattcgtgatcctcgttcctccgaaaagatgcagttttctggcttcatttctcca
catgttagtggtggaagcagttcagttggtgatggatcatctgaaggaatacctttgtac
tcatacaacatggacaaacgagcaactggagttgcacctgctggatctgattctgcatca
cagtggaacagctttgggattggttcatcatcaatgccttgggtagactcacttaataaa
tcctttagcttggctaattcatccgtggcacctaagcttgtttcaggctcccttagcatt
agtaatggctctaagcagttctacaaagcgttacgggaagcagaaggcagagaaaatgat
caaactgtctacatcaccaacaagtttcaagacataggagtatctggtttgttaaaagga
agttctattaatgtggaggatgtcccttcaccatctgatgcaacaggattgacatctttt
gcccgagcatcatcacttccagactctggatggaggcctcgtggggtattggtagcacat
ctccaggaacaccgttctgcggtcaatgacattaccatctcatctgatcacagctttttt
gtaagtgcatctgatgattctactgtgaaagtatgggatacaaggaagctggaaaaggac
acctctttcaggtcaaggctgacctactctttagatggaagccgggcactatgtgctaca
atgctacgtgggtctgcacaagttgttgttggagcatgtgatggaatgatacatatgttc
tccgttgatcatatttccagagggttaggaagtgttgttgagaagtattcaggtatcgcc
gacataaaaaagagggaggttggggaaggagccattctcagcttgttgaactatacaatg
gatggctgtcccagtcagacaattatgtacagcacccagagctgtgggatccatctctgg
gatacaagaacaaattcaatgtcatggacattgaaatcagttcctgaggagggctatgtg
tcttctctggtgacaggtccttgtggaaactggtttgtatcagggtcttcgaggggtgtg
cttactctttgggatcagaggttccttttacctgttaacacatggcaatattctctagta
tgccccatagagaaaatgagtctgcttgtaccgcctccaaatgctcccaggtctactgca
ggaagacccctggtatatgtagctgcaggttctaatgaagttgccctctggaatgcagag
aatgggagctgccaccaggtactgcgattgtcaaacagtgaatctgatgctgaaagctct
ggcctcccttgggccttagccaggcctcccaaaaagtccagttctaaacaagatatgaaa
cgaaatgtcaatcctaagtaccgagttgatgagttgaatgaacccccagctcgtcttcct
ggtatccgttcaatgctccccttacctggaggagatctattgactgggggaactgacttg
aaaattcgtcggtgggaccactgcagtcctgatcgtagttattgtgtttgtgggccatca
ctgaagggagtaggaaatgatgagttttatgaaaccagatctagttttggggtgcaaatt
gtgcaggagacgagcaggagacctccagcaactaagttgacaacaaaagctctccttgct
gctgccgccacggattctgcaggttgccaccgtgactctgtactttcgctggcttctgtc
aagttgaaccaaaggctcttgatatcaggtagtagggatggtgcgatcaaggtctggaag
tga
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