Telopea speciosissima (New South Wales waratah): 122661926
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Entry
122661926 CDS
T07910
Name
(RefSeq) RNA-binding protein 208-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122661926
03041 Spliceosome [BR:
tss03041
]
122661926
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122661926
Spliceosome [BR:
tss03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122661926
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_8
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
122661926
NCBI-ProteinID:
XP_043713378
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Position
5:28400107..28427183
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AA seq
436 aa
AA seq
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MQQRLKQQQQQALMQQALLQQQQLYHPGVLAAAMTQMDPVPSGNLPPGFDSSTCRSVYVG
NIHVNVTETLLAEVFSSTGPLEGCKLIRKEKSSFGFVDYHDRRAAAYAIMTLHGRQLYGQ
AIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDHKTVRS
RGFGFVSFRNQQDAQRAINEMTGKWLGNRQIRCNWATKGAGLPEEQQNNDNQNAVVLTNG
SSDGGMENTNEEAPENNPAYTTVYVGNLAHEVTQTELHRQFHALGAGVIEEVRVQRDKGF
GFVRYHTHEEAALAIQMANGKIVCGKSMKCSWGSKPTPPGTASNPLPPPVPPFQILTTPG
MNQGYSPAELLAYQRQLALSQVAAGSGMSGQALVQLAGQHSLAATQASMGLNSGGSQAMY
DGYPNNSSGQQLMYYH
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagagattgaagcagcagcagcaacaagccttgatgcagcaagcgttgcttcag
cagcagcagctataccacccaggcgtacttgccgctgctatgacgcagatggatccggtt
ccaagtggaaatctgcctcctgggtttgattcatctacatgccgcagtgtgtatgtagga
aatatccatgtcaatgtcactgaaacccttcttgctgaggttttcagtagtaccggccca
cttgaaggatgcaagctcattagaaaagagaagtcatcttttggctttgtggactaccat
gatcgtagggctgcagcttatgcgataatgacgttgcacggacgccaactttatggtcag
gcaattaaggtaaactgggcatacgccagtgggcagagagaggatacttcagggcacttc
aatattttcgttggtgatctgagtccagaggttactgatgcaactctatttgcgtgcttc
tccgtgtatcccagttgttcagatgcaagggttatgtgggatcataagactgtccggtca
agaggatttggctttgtttccttccgtaatcagcaggatgcacaaagggctataaatgaa
atgactggtaaatggctagggaataggcaaataagatgcaactgggcaactaaaggagct
ggcctccctgaagagcagcagaataatgataaccaaaatgcagttgtacttacaaatgga
tcttcagatggaggtatggagaacaccaatgaggaggcgccagaaaacaatccagcatac
actactgtctatgtcggcaaccttgctcatgaggtgactcaaactgaacttcatcgtcag
tttcatgctcttggagctggggttattgaggaagtgcgagtccaaagggataaagggttt
gggtttgtaaggtaccatacacatgaggaagcagctttggccattcaaatggccaatggg
aagatagtctgtggaaagtccatgaagtgctcatggggtagcaagccgactcctccaggg
actgcatcaaacccactgccacctccagtacctcccttccagatcctcacgactcctgga
atgaaccagggttactcaccagcagagttattggcttatcagcgtcagcttgccttgagc
caggttgctgcaggctctggcatgtcaggccaggctcttgtgcaattggctgggcagcac
agtcttgctgcaacccaggcttccatgggtctgaactctggtggatcacaagccatgtat
gatggttatccaaacaactcgtcaggccagcagctcatgtattaccactga
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