Telopea speciosissima (New South Wales waratah): 122661982
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Entry
122661982 CDS
T07910
Name
(RefSeq) vacuolar protein sorting-associated protein 35B
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122661982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122661982
Membrane trafficking [BR:
tss04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
122661982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Urb2
Motif
Other DBs
NCBI-GeneID:
122661982
NCBI-ProteinID:
XP_043713450
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All DBs
Position
5:17580596..17599245
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AA seq
790 aa
AA seq
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MIGDGVEDEEKWLAEGIAGLQHNAFYMHRALDSNNLRDALKYSAQMLSELRTSRLSPHKY
YELYMRAFDELRKLEMFFKEETKRGCSVIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDILKDLVEMCRGVQHPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVMDAVEFVL
QNFTEMNKLWVRMQQQGPTREKEKREKERNELRDLVGKNLHVLSQIEGVDLDMYKDTVLP
RVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPTVDIKTVLSRLMD
RLSNYAASSAEVLPEFLQVEAFSKLSNAIGKVIEAQVDMPVVGAITLYVSLLTFTLRVHP
DRLDYVDQVLGACVKKLSGRPRLEDSRATKQVVALLSAPLEKYNDIVTALMLSNYPRVMD
HLDNATNKIMAVVIIQSIMKNNSCILTADKVEALFELIKGLIKDLDGSPIEELDEEDFKE
EQNSVARLIHMLYNDDPEEMFKIICTVRKHILTGGPKRLSFTVPPLIFSALKLVRRLQGQ
EGEVAGEDEAATPKKNFQLLHQIIEALSHVPAPELALRLYLQCAEAANDCDLEPIAYEFF
TQAFILYEEEVADSKAQVTAIHLIIGTLQRMNIFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDEQDGIKDGERVLLCLKRALRIANAAQQMANVTRGSSGPVTLFVEILN
KYLYFFEKGNPQITSEAVQGLVELITTEMQSDTTTPDPSTDVFFASTLRYIQFQKQKGGV
MGEKYEPIKV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatcggagacggagtggaagacgaagagaaatggctggcggaagggattgctggcctt
caacacaacgccttctacatgcatcgagctctggattcgaacaatctcagagacgctctc
aagtattccgcccagatgctttccgagcttcgcacttcccgtctttcccctcacaaatac
tatgagctttacatgcgggctttcgatgagttgaggaaattggagatgttcttcaaggag
gagaccaagcgcggttgctctgtaattgacctctacgagcttgtgcagcatgctggcaac
atattgcccagactgtatctcctgtgcacggtggggtctgtatacatcaaatcaaaggag
gctcctgctaaggatattcttaaagacctcgtggaaatgtgtcgtggtgttcaacatcct
gtacgtggcctctttctcaggagttacctttctcaagtcagtagggataagttgcccgat
attgggtctgagtatgagggtgatgctgacacagtcatggatgctgtcgagtttgtactt
caaaacttcacggagatgaataagctttgggtccgaatgcagcaacagggacccacccgg
gaaaaagagaagcgggaaaaggaaaggaacgagcttcgtgatcttgttggcaaaaatcta
catgtcctcagtcagattgagggtgttgaccttgatatgtacaaagatactgtgcttcca
agagttttagagcaggttgttaattgcaaggatgagcttgctcaatattacttgatggat
tgcataatccaagtctttccagatgaatatcatttgcagactcttgagacattgttgggt
gcttgcccccagcttcagccgactgttgatatcaagacagtgttatcacgacttatggat
agactgtcaaactatgctgcttcaagtgcagaagtattacctgaattcttgcaggtagag
gctttttctaaattgagcaatgccattgggaaggtgatagaagcacaggttgatatgcct
gttgttggagctataactttgtacgtgtctcttctgacatttactcttcgtgtccatccg
gatcggcttgattatgtagatcaagtgctgggagcatgtgttaagaaactttctggaaga
ccaagacttgaagatagcagagctacaaagcaagttgttgcacttctgagtgctcctttg
gagaaatacaatgatattgttactgctctgatgctttcaaactatcctcgagtgatggat
caccttgataatgctacaaataaaatcatggcagtggttattattcaaagcatcatgaaa
aataacagttgcattttgactgctgataaggttgaagcattgtttgaactaataaagggg
cttataaaggatttggatgggtctcctatcgaagagcttgatgaagaggatttcaaggag
gagcaaaattctgttgctcgtctcattcatatgctctataatgatgatccagaggagatg
tttaagattatatgcactgtgaggaagcatattcttactggaggaccaaaacgactttct
tttactgttcctcctctaattttttctgcccttaagttggtcaggcgattgcaaggtcag
gagggggaagtggctggagaagacgaggctgccactcctaagaaaaattttcagcttttg
catcagattattgaggctctgtcacatgttccagcacctgaacttgctcttagattgtac
ttgcagtgtgctgaggccgcaaatgactgtgatcttgaacccattgcatatgagtttttc
acccaagcatttatcttgtatgaagaagaagttgcggattcaaaagcacaggtaactgca
atacacctaataatagggactcttcagaggatgaacatatttggtgtggagaacagggat
acgctaactcataaagccacagggtattcggcaaaacttctaaagaaacctgatcaatgc
agagcagtttatgcgtgttcacatctcttctgggttgatgaacaagatggtatcaaggat
ggagaaagggtcctgctttgcctaaagcgtgccttaaggattgcaaatgctgctcaacag
atggccaatgtgacaaggggtagcagtggaccagtcacactctttgttgaaatactaaac
aagtatctttatttctttgagaaaggaaaccctcagatcactagtgaagcagttcagggc
ctggttgaactaatcacaacagagatgcaaagcgatacgacgacaccagatccatctaca
gatgtattttttgccagtacattgcgctacattcagtttcagaaacagaaaggtggtgta
atgggtgaaaaatatgagcccatcaaagtctga
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