Telopea speciosissima (New South Wales waratah): 122661993
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Entry
122661993 CDS
T07910
Name
(RefSeq) protein TRANSPARENT TESTA 9 isoform X1
KO
K19513
protein CLEC16A
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122661993
03029 Mitochondrial biogenesis [BR:
tss03029
]
122661993
Membrane trafficking [BR:
tss04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
122661993
Mitochondrial biogenesis [BR:
tss03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
122661993
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FPL
CLEC16A_C
NST1
Motif
Other DBs
NCBI-GeneID:
122661993
NCBI-ProteinID:
XP_043713461
LinkDB
All DBs
Position
5:42992967..43096489
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AA seq
843 aa
AA seq
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MWFSFWRSRNRFSLEELRYLTDQLEKVQIVNESNKEFVIEALRSIAELVTYGDQNDPAFF
EFFMEKQVMGQFVRILNVSRTSSVPLQLLQTMSIMIQNLKSEHSIYYIFSNEHINSLITY
SFDFRNEELLSYYVSFLRAISGKLNKSTISLLVKTQNDEVVSFPLYNEAIRFAFHEENMV
RIAVRALTLNVYHVGDESVNKYVNSPPLADYFSNLISYFREQCISLDRWVSEASKYVLGN
PGPESTSCILAAVEEIEDYLYYFSDVISAGIPDLGRLITENISQILIFPLLLTSLNMEHT
DETHISGTTSRYLLCCILRIVKTKDLANSIAAALFCPPDAFSPISETKPNGCMSGHVSSH
ENQQLDNDASHSEADTQHLRVVVANSSSSPQIHPGEDFVLQHGCDSPRLTLRELLLSYVV
SGNDIQVLSSLSVLATLLQTKELDESMLDALGILPQRKQHKKLLLQALVGEGSGEEQLFS
SETSSLKDGVHSEVDSYLQKLKDQYGLLCSCSEIGASPRGNRFQVLDSLVSLFCRSNISA
ETLWCGGWLLRQLLPYSEAEFNSHHLKLLKDTYKNCISGLLQEVRGTWPDLLITVLIDEW
KKCKKAIEASSPQKEPRHILLPSQRSDIEGESSFTAGERMCEMVKVFVLLHQLQVFSLGR
TLPDQPPILSPTDLPINSRAKTAGLDVLGPKPGTEIKLVDAVPCRIAFERGKERHFCFLA
TSRGTLGWVLLAEELPLKQNFGIIRVAAPLAGSMPRIDDKHSKWLHLRIRPSTLAFMEPS
KSEALGKAKTKALIDGRWILAFRDEEACKSALSMILEEMDLQSNEVERRLKPLLNLDRPL
DVL
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtggttttctttctggcgatcgaggaatcgattctccttggaagaactcagatattta
actgaccagctggaaaaagttcaaattgttaatgaaagtaacaaggagtttgttattgag
gctctgaggtcaattgctgagttagtgacatatggtgatcagaacgatccggcctttttt
gagtttttcatggagaagcaggtcatggggcagtttgtacgtatattaaatgttagtaga
acttcgagtgttcctcttcagttgttacagacaatgagcattatgatacagaacttaaaa
agtgaacattctatctattacattttcagtaacgaacatataaactcccttataacatat
tcttttgacttccgtaatgaagagctgctgtcgtactacgtatcctttttaagggcaata
agtgggaagctgaacaaaagtaccatttctctgcttgtgaagacccaaaatgatgaggta
gtttctttcccactgtacaatgaggcaataaggtttgcttttcatgaagagaacatggtc
cgcattgctgtacgtgctttgacactgaatgtctatcatgttggagatgaatctgtgaac
aaatatgtcaatagtccgcctttagcagattatttttcgaatttgatttcatacttccgg
gagcagtgcatcagcttggatagatgggtatctgaagcttcaaagtatgtgttggggaat
cctggcccagaatcaacctcttgcattcttgctgctgtagaagaaattgaagattatttg
tattattttagtgatgtcatttctgctgggattcctgatcttggaagattaataacagaa
aatatttcgcagattctaatatttcctttgcttcttacttctctgaatatggagcatact
gatgaaacacacattagtggcactacatctcgttatctactttgttgcatcttgcgcatt
gttaaaaccaaggatttggcaaatagtattgcggctgctctattctgccccccggatgcg
ttttctccaatttctgaaactaaacccaatggctgtatgtcgggtcatgtttcttcacat
gaaaaccaacagctggataatgatgctagtcactcagaggcagatactcaacatttaaga
gttgttgtagcaaattcatctagttctcctcaaattcatcctggagaagattttgtcttg
cagcatggttgtgatagtccacgtttgactttgagggagttgttgctatcatatgttgtt
agtggaaatgacatacaagttttgagttctttgagtgtgttggctacattgttgcaaaca
aaagaacttgatgaatcgatgctggatgcacttggaattcttccacaaagaaaacaacat
aaaaaactcttactgcaagctttggttggtgagggctcaggtgaggagcagcttttttcc
tctgaaactagctcattgaaagatggtgttcatagtgaggttgatagctatctccaaaaa
ctgaaggatcaatatggattgctgtgttcttgcagtgaaattggagctagccctcgtgga
aatagatttcaggtgctcgattcattggtgagcctcttttgccggtcaaatatttctgca
gagacattgtggtgtggtggttggctgttacgtcagcttcttccttacagtgaggcagag
ttcaacagtcatcatcttaaactgctgaaagacacgtacaagaattgcatcagtggtctt
ctccaggaggttagggggacatggcctgatttacttataacagtccttattgatgagtgg
aagaagtgcaaaaaagcaatagaggcctcatccccacagaaagagcccaggcacatcctc
ttgccatcacaaaggagtgatatagaaggtgaatcatcttttactgcaggagaaagaatg
tgcgaaatggtgaaggtcttcgtgcttcttcatcaacttcaagtcttctcccttggaagg
actttacctgatcagccccctattctttctccaactgatctcccaataaactctcgagct
aaaactgctggactagatgtcttgggtccaaaacctggcactgaaataaaactggtagat
gcagtgccatgtagaattgcatttgagaggggaaaagaacgtcatttttgctttttagca
acatcgagaggaacacttgggtgggttttacttgcagaagaattacccctcaagcagaat
tttggaattatccgggttgctgcacccttggctggctctatgcccagaatagatgataag
cattcaaaatggttacacttacgcatccgtccatctactttggccttcatggaaccctcc
aagtctgaagcccttggaaaagcaaagacaaaagctttaattgatgggaggtggatcctt
gcattcagggatgaggaagcttgcaagtctgccttgtctatgatacttgaggagatggat
ttgcaaagtaatgaagtggagagaagattaaagcctttgcttaacctggacagacctcta
gatgtcctatag
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