Telopea speciosissima (New South Wales waratah): 122662109
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Entry
122662109 CDS
T07910
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
122662109
Enzymes [BR:
tss01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
122662109
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
122662109
NCBI-ProteinID:
XP_043713605
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Position
5:3798706..3806840
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AA seq
643 aa
AA seq
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MSPRGVQLQVQDHYVVMDNGLLQVTISNPDGIVTGIRYNGITNLLEIQNEEVNRGYWDVV
WSGEGRTGVFEVIMATNFEVITENEEQVEVSFKRPWDTSMDGKFIPINIDKRFIMLRGCS
GFYSYGIYEHLEGMPAFSLAETRIAFKLRKDKFHYMAMADNRQRIMPMPDDRLPGRCQTL
AYPEAVLLTNPINPDLKGEVDDKYQYSCENKDNKVHGWICFDNSPVGFWQITPSNEFRTG
GPLKQNLTSHVGPTTLAMFLSAHYSGEDLVPKFQNDEQWKKVFGPVFIYLNTVLDGEADP
YSLWDDAKSQMMVEVQSWPYGFPASEDFPSSDQRGTISGRLLVHDRYIEEGYISADSAYI
GLALPGEVGSWQRECKGYQFWTKADADGYFSISDVRTGDYNLYAWVPGFIGDYKYDVEVT
ITSGCDVDLGDLVYEPPRDGPTLWEIGIPDRSAAEFYVPDPNPNYINKLFVNHPDRFRQY
GLWERYAELYPDGDLIFKVGTSDYRKDWFFAQVTRKKSNNTYQATTWQIIFKLDSINDNT
TYYLRLALASATVSELQVRFNDPKANPPHFSSGVIGKDNSIARHGIHGLYWLYNVEVPST
RLVQGDNTIYLTQSRSTSPFQGIMYDYIRLEGPPTSSNSNRKH
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctcgtggagtgcaattgcaagtacaagatcactatgtagtgatggataatggg
ctcctccaagtaacaatctcaaacccagatgggatagtcacaggcatacgatacaatggc
attaccaatctacttgaaattcaaaatgaagaagttaacagagggtattgggacgtcgtt
tggagtggagaaggccgaactggagtttttgaggtgataatggctacaaattttgaggtt
ataacagaaaatgaggagcaggtggaagtttccttcaaaagaccatgggatacctccatg
gatggaaaatttattcctataaatatagataagaggtttattatgttaaggggttgctcg
ggcttctattcttatgggatatatgagcatttagaaggcatgcctgccttcagccttgca
gaaaccagaattgcattcaagcttagaaaagacaagtttcattacatggccatggcagat
aacaggcaaaggatcatgcccatgcccgatgatcggttgcccggacgatgccaaaccctt
gcctacccggaagcagttctcttaaccaatcccattaatccggacctaaaaggagaggtg
gatgacaagtaccagtattcttgcgaaaacaaggataacaaggtgcatgggtggatatgc
tttgacaactcacctgtgggcttctggcaaatcactcccagtaatgaatttcgaactggt
ggacctctaaagcaaaacctcacctcccatgttggcccaaccactcttgctatgtttctg
agtgctcactactcgggagaagatttggtgcctaaattccaaaacgatgaacagtggaag
aaggttttcggcccagtttttatttatcttaatacagttttggatggtgaggctgatcca
tattcactttgggatgatgccaaatcacagatgatggtggaagtccaaagttggccctac
ggttttccagcctctgaggatttcccttcttcggatcaacgaggaactattagtggtcga
ttactggtccatgacaggtacatcgaggaaggttacatatcggctgactcggcttatatc
gggttggctctgccgggagaggttggatcatggcaaagagaatgcaagggctaccagttc
tggactaaagcagatgctgatggttacttctccataagcgatgtgcgcactggagattat
aatctttacgcatgggttcctggttttattggagactacaaatatgatgttgaggtcacc
atcacctcaggttgtgatgtggatctgggtgatctggtatatgaacctccaagagacgga
cccacattgtgggagataggcatccctgaccgttcagctgcagagttctacgttcctgat
cccaatcctaactacatcaacaaactctttgttaatcatcctgacagatttaggcaatat
ggattgtgggagagatatgcggaattatatcctgacggagatctaatcttcaaagtcggc
acgagtgattacaggaaagattggttctttgctcaggtcactaggaaaaaaagcaataac
acataccaagcaaccacatggcagatcatattcaaactcgactccatcaatgataatacc
acctattacttgcgactagctcttgcatccgccacagtttctgaattacaggttcgattc
aatgacccgaaagcaaaccctccacacttttcgagtggggtaatagggaaggacaactca
attgcgaggcatggcattcatgggctttattggctatataatgttgaggtaccaagcacc
agacttgtgcaaggagacaatacaatctatttaactcaatcaagaagtaccagccctttt
caagggatcatgtatgactacattcgtttagaagggcccccaacttcctccaattctaac
agaaaacattaa
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