Telopea speciosissima (New South Wales waratah): 122662110
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Entry
122662110 CDS
T07910
Name
(RefSeq) rhamnogalacturonate lyase-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
122662110
Enzymes [BR:
tss01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
122662110
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
122662110
NCBI-ProteinID:
XP_043713606
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Position
5:3815858..3820808
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AA seq
564 aa
AA seq
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MEKEEQIEVSFTVNWDHSIGDKLVPLNIDKRFVMLPGRSGFYSYAIYEHLQGWPDFSLDE
TRIAFKLRTDLFNYMAISDQRQRIMPSAADRASGQPLAYPEAVKLTNPSNPELQGEVDDK
YQYSSENQDNRVHGWISFDPPVGFWIINPSDESRIGGPLKQELTSHVGPTSLAMFSSNHY
SGEDLSVKLSNGEEWKKVFGPVYTYLNSASDPENATELWDDAKQQMLTEVQNWPYSFPAS
DDFLSSDQRGDVTGQLSIQDRFLQKENIPAVSAHLGLAALGDVGSWQTENKGYQFWTKAN
SDGSFSINGVRPGVYNLYGWIPGFIGDYKYDVNITITPGFKLNLGSLTYFPPRQGPTLWE
IGIPDRSAGEFYIPDPSPNYINKLYTSNPNSNDRDSVPVDKFRQYGLWERYAELYPREDP
VYTVGTSDYRTDWFFAHVNRRTDNTTYQATTWRIVFKLDTVIRDPYKTYMLRVALASATS
AELQVRVNNPNVYPPHFTTMQIGKDNAIARHGIHGLYRLYNIEIRSDLLLLGENSIYLTQ
SRHISPFQGIMYDYIRLEGPSTSS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggaagaacaaattgaggtttcattcacagtaaactgggatcactctattgga
gacaaattagttcccttaaatatagacaaaaggtttgtaatgctaccaggtcgctctggt
ttttactcatatgccatttatgagcatttacaagggtggcccgatttcagcttggatgaa
accagaattgcttttaagctcaggacagacttgtttaactacatggccatatcggaccag
aggcaaaggatcatgccctcggctgcagaccgggcatcgggtcaacccttggcctaccct
gaagcagtaaagttgacaaatccaagcaatcctgaactccagggagaggttgatgacaag
tatcagtattcaagtgaaaatcaagataatagagtccatggttggatcagcttcgaccct
cccgttggattctggattatcaatcccagcgatgagtcccgtataggtgggcccctcaag
caggaactcacctcccatgtgggccccacaagcctcgcgatgttttctagtaatcactac
tctggcgaggatctatcggtgaagttaagtaatggagaggaatggaaaaaagtgtttggc
cctgtttacacatatctgaactcagcctctgatccagaaaatgccactgaactatgggac
gatgcaaaacaacagatgttgacagaagtacaaaactggccatacagtttcccagcttca
gatgacttcctttcttcggatcagcgtggtgatgttactggtcaattatctatccaagac
aggttccttcaaaaagagaatatacctgccgtctctgctcacttaggtttggctgcatta
ggagatgttggatcttggcaaacagaaaacaagggttaccagttctggactaaagctaat
tctgatggatctttctctataaatggtgttcgacctggagtttataatctttatggatgg
attcctggttttattggagattacaaatatgatgttaatattaccatcaccccaggattc
aaattaaatttaggtagtcttacatattttccaccaaggcaaggtcctaccttgtgggaa
ataggaattcctgatcgttctgcaggggaattttacattcctgatccaagcccaaactac
ataaataaactttataccagtaatccaaacagcaatgatagagattcagtacctgtggat
aaatttagacaatatgggttgtgggagaggtatgcagaattgtatcctcgtgaagaccct
gtgtatactgttggtactagtgactacagaacagattggttctttgctcatgttaacagg
aggactgataacaccacataccaagcaaccacatggcggattgtattcaaacttgacact
gtgatcagagacccatataaaacttatatgttgagagtggcactcgcttcggctacaagt
gccgaactgcaggttcgggtcaacaatccaaatgtgtatcctcctcacttcacaactatg
caaataggaaaggacaatgcaatcgcgagacatggaatccatggactgtatcggctttac
aacattgagataaggagtgatttgcttcttcttggagaaaatagcatttatttgactcaa
tcaagacatataagcccattccaaggaattatgtatgattatattcgtttggaagggccc
tctacttccagttaa
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