Telopea speciosissima (New South Wales waratah): 122662112
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Entry
122662112 CDS
T07910
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122662112
Transcription machinery [BR:
tss03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
122662112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
122662112
NCBI-ProteinID:
XP_043713608
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All DBs
Position
5:22148547..22163206
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AA seq
625 aa
AA seq
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MGLELASNGTEYYEEMVDVDYSDSEVVSYVRDTLKSVSQGDTDRYNQLIGVMHYTEGLAP
DEVALLVTSLKALSGVVSSVDIVLHEALLSSIFGMSMWNYGPDVMDALVELIKSLAASNG
VFVDSCLDMLVRNFMPPKSFIGFLRQPRGCARKDEVLNRVHSALTDIAYLVPLAPSRLLP
IILKRMPNMFDNEALLVMYVESMLRLESSAIGELIGSTMIMAVVDRLVDLDVELGWDEII
QEDSSKGIFHMELEDLEEAADYIVKDGSEFSKGTFCGLNFGGNVVAEKLDSLMVLTCQHL
ESCYDEGRHTKVFDTLLQSFRVTILNAYKSKFAQFVMFYACSLDPGSCAVRFANLLSDIF
LCETHPPLTRMSAAAYLGSYLARAKFLSSSLIAYMLKRLVGWCYKYIQIQDGEVKTINPQ
VHRIFYSGCQAVMYVLCFRMSSMVDVPPLKSQLFQMPLEQILRHPLDPLKVCLPSIVKEF
LRQAKAARLFTQSENFLFSSLLESDSSKAFGGMERLDMFFPFDPYLLKKCDRFIRPNFVY
WSMVRTTYDDDDEASSEEGDDDVLSDDAAARSFDEHDIDLDEFESSMNKMSITPRTSSKH
GLTGGLRVPMRMPAKIRPSASPESL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgggcctggagttagcaagcaacggaacagaatattatgaggagatggtggatgttgat
tatagcgattcagaggtagtctcttatgttcgagacacccttaaatcggtctcccagggt
gatactgaccgttataaccagctaattggagtcatgcattacactgaaggtcttgctcca
gatgaggtggccttgcttgtgacaagtttgaaggcactttctggagtggtttcctctgtt
gatatcgttctccatgaagctcttctatcatctatttttgggatgagtatgtggaactat
ggacctgatgttatggatgcgttagtggaactgattaaatctttggctgcttcaaatgga
gtatttgttgattcatgtttggatatgcttgttaggaattttatgccacccaaatctttc
ataggtttcttgagacagccccggggctgtgcaagaaaggatgaggttcttaatcgggtg
cattcagcgttgactgacattgcttacttggtgccacttgctccctcaagattgttgccc
ataattctaaagagaatgccgaacatgtttgataacgaagctttactcgtgatgtatgtg
gagagcatgttaaggctggaaagcagtgcaattggagaacttattggtagcacaatgata
atggcagtggtggataggcttgtagatttagatgtggagttgggatgggatgaaattata
caggaggactcaagtaaaggaatatttcacatggaattagaagatttagaggaagctgca
gattatattgtgaaagatggatccgagttttcgaaaggaactttttgtggactgaacttt
ggaggcaatgtagttgctgaaaaattggatagcttgatggtactcacgtgtcaacatctg
gaatcatgttatgatgaaggccgtcatacgaaggtatttgatactcttcttcaatccttt
cgggtcactattctcaatgcatacaagtcaaagtttgctcagtttgtgatgttctatgct
tgttcactggatcctggaagttgtgctgtgagatttgccaatttgctttcagacatattt
ctgtgtgagactcaccctccacttactaggatgagtgctgctgcttatcttggtagttat
ttggcccgtgcgaagttcttatcatcctctttgattgcctacatgttgaaaagactcgtt
ggttggtgttataaatatatccaaattcaggatggtgaagtgaagacaataaatccacaa
gttcataggatcttttattctgggtgccaggctgtcatgtatgtgctttgcttcagaatg
agctcgatggttgacgtccctcctctcaaatcgcagcttttccaaatgcctttagaacaa
atcttgcgtcacccactggatccattgaaggtgtgcctgccttccatagtgaaggaattc
ctccgacaggcaaaagcagctcgcctgttcacacagtcagaaaacttccttttcagtagc
ttgctggaatcagattcatccaaggctttcggagggatggaaagattggacatgttcttc
ccttttgacccatatttattgaagaaatgtgacaggtttattcgtccaaattttgtgtat
tggtcaatggttagaactacatacgatgatgacgacgaagcaagcagtgaagaaggtgat
gatgatgtcttgtcagatgatgctgctgctaggagctttgatgagcatgacattgatctc
gatgaatttgagtcctcaatgaacaaaatgtccattactccgaggacttcttcaaagcat
gggttgaccggtggtcttcgtgtgcccatgagaatgcctgctaaaataagaccttctgcg
agtccagaatcactgtga
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