Telopea speciosissima (New South Wales waratah): 122662138
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Entry
122662138 CDS
T07910
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tss03041
]
122662138
Spliceosome [BR:
tss03041
]
Common components
Common spliceosomal components
General mRNP proteins
122662138
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_8
DUF1866
Motif
Other DBs
NCBI-GeneID:
122662138
NCBI-ProteinID:
XP_043713639
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All DBs
Position
5:16644353..16700543
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AA seq
619 aa
AA seq
DB search
MDFDEYDYLEKTVENPEAPKEEKIANGGEETVKSGEKDRSRSSKRRTNENEDDLDSRSKR
ARPGDDSRDHVRHRERGASHHRSSPDYKSENAERNERDRHRKEHRDRDREKDRGRESDER
DGKDRDRDRDRERERDRERIRERDRESERDRERERERSRRSRSRSERHRSDRDRDAERER
DREKSRDREYREKERERELRYRDRDGRRYKEKKEEAEPEADPERDQRTVFAYQICLKADE
KDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQPLLGQPVMVK
PSEAEKNLVQSNAAAAAAGGVGGVIGPYSGGARRLYVGNLHFNITEDLLRQVFEPFGPVE
LVQLPLDLETGHCKGYGFVQFARLEDARAAQSLNGQLDIAGRIIKVSAVTDQAGMQDVGA
NAADFDDDDGGGLALNAHDRAALMQKLDRSGTASSIAGSLGASVVNGSGLTLSTASVLGA
ARMVAPLVSPLGQPTIPALAGMQGTGLPVPAVTVLPDDSIGVPSDCLLLKNMFDPMLETE
PDFDLDIKEDVQDECGKFGMVKHIYVDKATAGFVYLRFENSQSAINAQRALHGRWFAGKT
ISATFMPTQSYEAKFPDSR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgaatatgattatttagagaaaacagttgaaaacccagaagcgccgaaa
gaggagaagattgcaaatggtggcgaggagactgttaaatcgggagagaaggaccgtagc
cggagttctaagcgtaggactaatgagaacgaggatgacttagatagccgttccaagcga
gcaagacctggagatgactctcgtgatcatgttcggcacagagagaggggcgcctcgcat
caccgctcatctcctgactacaagtccgagaatgctgagaggaacgagagggaccggcac
cgcaaggaacacagagatagggatagggagaaggatagggggagggagagtgatgaaagg
gacgggaaggacagggaccgtgacagagatagagagcgggaacgagaccgtgaaaggata
agagagcgtgaccgagaaagtgaaagagacagggagagagaacgggagcgttcacgacgt
agcaggagccgctctgagaggcaccgcagtgaccgtgatagggatgctgaacgtgagaga
gacagggagaagagcagagacagagagtacagggaaaaagaaagggaaagggagttacga
tacagggatcgagatggcagacgatataaagagaaaaaggaggaagcggagcctgaggct
gatccagaacgagatcagaggactgtatttgcttatcagatttgtttgaaggcagatgaa
aaagatgtctatgaatttttttcaagggctggcaaggtgcgagacgtgcggctcataatg
gatcgcaattcaagacgttccaagggagtagggtacatagaattttatgatgcaatgtca
gtcccaatggcaatagcgctttctggtcagccacttcttggtcaaccagtgatggttaaa
ccttcagaagctgagaaaaatctggttcagtcaaatgcagctgcagctgcagctggagga
gtaggtggtgttattggaccgtattcaggaggcgctagaaggttgtatgtcggcaatctg
catttcaacatcacagaagatctacttcgccaggtttttgaaccatttggtcctgtggag
ctggtgcaattgcctcttgacctagagactggacattgcaaaggttatgggtttgttcag
tttgcacgtcttgaagatgccagagctgcacagagtctaaatggacaattagatattgct
ggtcggataatcaaggtatctgctgttactgatcaagctggaatgcaagatgttggggca
aatgctgctgattttgatgatgatgatggtggaggcttggctctgaacgctcatgataga
gctgctctcatgcagaaattggaccggagtggcactgcttccagtattgctggttcgctc
ggcgcatctgttgtcaatggctctggtctcactctatcaacagcatcagttcttggtgct
gcacgtatggttgccccccttgtttccccacttggacaacctactattcctgcacttgct
ggaatgcaggggacaggtcttccagttccagctgtgactgtgcttcctgatgatagtatt
ggtgtacccagtgactgtctattgctgaagaacatgtttgatccaatgttggagactgaa
ccagattttgatttggatataaaggaagatgttcaagatgaatgtggaaagtttgggatg
gttaagcatatctatgtggacaaggccactgctgggtttgtatacctgcgttttgagaat
tcacaatcagccataaatgcacagcgtgcactccatggaaggtggtttgcggggaagaca
atatcagcgacgttcatgccaactcaaagctacgaggccaaatttcccgacagtagatag
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