Telopea speciosissima (New South Wales waratah): 122662191
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Entry
122662191 CDS
T07910
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122662191
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tss01009
]
122662191
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tss03041
]
122662191
Protein phosphatases and associated proteins [BR:
tss01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122662191
Spliceosome [BR:
tss03041
]
Common components
Common spliceosomal components
SR proteins
122662191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
122662191
NCBI-ProteinID:
XP_043713699
LinkDB
All DBs
Position
5:complement(23601982..23607744)
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AA seq
228 aa
AA seq
DB search
MADSPRRRSSRSPSPWQGNSTRSRSRSRSRSRPRSPSRSRSRSGSLVRDAANPGNTLYVT
GLSTRVTETDLEDHFSREGKVISCRLVVEPRTRISRGFAFVTMATLEDAERCIKHLNQSV
LEGRYITVEKSRRKRPRTPTPGNYLGMKSSRESSYRGDRGRYRGGYGRDDYGYRRSPRRS
PYRGGRDYSPRRSPYGGRPRRERSRSLTYSPYGSPERGYGRRANVYPR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctcctcgtagaaggtcttcacgttctccttccccttggcaaggaaattcc
accagatctagatccaggtccaggtccagatcaagacccaggtccccatcccgctctagg
tcaaggtctgggagtcttgtcagggatgctgcaaatcctggaaatacactctatgtaact
ggtctgtctactagagtcacagaaacggatcttgaagatcatttctctagggaaggaaag
gtaatttcatgtcgactggttgtggagcctcggacacgcatatctcggggttttgctttt
gtgaccatggccaccttagaggatgctgaacgctgcatcaagcatcttaatcagtcagtt
ctggaaggccggtatataactgtggagaagtcaaggaggaaacgcccgaggacacctaca
cctggaaactatcttggaatgaaaagttccagggagtcgagttatcgtggtgatcgtggt
cggtaccgtggtggctatggccgtgatgattatggataccggaggtctcctaggcgctca
ccttatcgagggggccgtgattattctcctaggcgctctccttatggtggtagaccaaga
agagaacggtctaggtcgcttacttactctccatatggtagcccagaaaggggctatggg
cgtagggctaatgtatatccaaggtaa
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