Telopea speciosissima (New South Wales waratah): 122662197
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Entry
122662197 CDS
T07910
Name
(RefSeq) mRNA-capping enzyme-like isoform X1
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122662197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122662197
Enzymes [BR:
tss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
122662197
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
122662197
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
122662197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
DNA_ligase_A_M
Tc-R-P
PTP-NADK
PTP-SAK
Y_phosphatase
Y_phosphatase2
Y_phosphatase3
SPN1_m3Gcap_bd
Motif
Other DBs
NCBI-GeneID:
122662197
NCBI-ProteinID:
XP_043713707
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All DBs
Position
5:68536867..68621764
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AA seq
693 aa
AA seq
DB search
MIFSMDLNASPLPEEDDEAIFEDHDHEDHVEGRLAMEEHVETAVETFRREREERRQRLRR
EYQDEGPNRSLQQPRKDLVSQTKRPRSYDRFKPPSGWLDCPPYGKCMDFLIPSKVPLGES
FNDSVTPGKRYSLRQVIHQQKVAGREFGLVIDLTNTTRYYSPADCKKQGIKHVKIACKGR
DSVPDNESVNNFVYEVFQFLSRQKQSKRFILVHCTHGHNRTGFMIIHFLIRSQSISVTEA
IQRFASARPPGIYKQDYIDALYTFYHERKPETVTCPPTPEWKRSSDFDLNGEAVPDEDDD
GGIAVSLHQDDHVENEVMTNDDVMGDAIPADQQDAMRQFCYHTLKLGTGARRILQFPGSH
PVSLNRENLQLLRQRYYYATWKADGTRYMMLLTYDGCYLIDRNFCFRRVQMRFPTRNTNE
GLPEKTHNLTLLDGEMIIDTVPDTQKQERRYLIYDLMAINGTSVVERPFYERWKMLEKEV
IEPRNLERQHINHSRNSSYRYDLEPFRVRRKDFWLLSTVNKLLNEFIPRLSHEADGLIFQ
GWDDPYVPRTHEGLLKWKYPEMNSVDFLFELEDEDRQLLYLHERGNRKLMEGNLVVFKGD
LDPSAFSGKIIECSWDSEEEVWVCMRIRADKSTPNEFNTYKKVMRSIRDNITEDVLLNEI
GEIVRLPMYADRIRNDSKAAQMHHQHQNSARRK
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgattttctctatggacttaaatgcctcaccgttacctgaagaagatgatgaagcgatc
tttgaagatcatgatcacgaagatcacgttgaaggacgacttgcaatggaagaacatgta
gagactgcagttgaaacttttcgcagagagcgtgaagaacgacgtcaacgattgagaagg
gaataccaagatgagggcccaaaccgctcattacagcaaccgagaaaggatcttgtttct
caaactaaaagacctagatcttatgacagatttaagcctccatctggttggctggattgt
cctccttatggcaagtgtatggatttcttaatcccttctaaagttcctcttggggagtct
ttcaatgactctgttactcctggtaaaagatattctttgagacaagtgattcatcaacaa
aaagtggctggcagagagtttggcttagtaattgatctgacaaacaccactcgctactat
tctccggcggattgtaagaaacaaggtattaagcatgttaagattgcatgcaaaggaagg
gattctgtacctgataatgagtctgtaaataacttcgtgtatgaggtcttccagtttttg
tcccgccaaaaacaatccaagaggtttattcttgtccattgcactcatgggcataatcgc
acaggctttatgatcattcattttcttatccgttcacaatctatttctgtcactgaggct
atacaaagatttgctagtgcacgcccgccaggaatatataaacaggactatattgatgca
ttatacactttctatcatgagaggaaacctgaaacagtcacttgcccaccaaccccagag
tggaaaagatcttctgattttgacctgaatggtgaagctgtgccagatgaggatgatgat
ggtggtatagctgtttctttgcatcaagatgaccatgtagaaaatgaagtaatgacaaat
gatgatgtcatgggagatgcaatacctgctgaccagcaagatgcaatgcgacagttctgt
tatcacactctcaaattgggtacaggggcgagacgaatcttacagtttccaggctcgcac
cctgtatctctcaacagggaaaacttgcaattgttgagacaacggtattactatgcgaca
tggaaagctgatggaacacgctatatgatgctcttgacttatgatggatgttacttgatt
gatagaaacttttgttttcgaagggtgcagatgcggtttccgacaagaaacacaaatgag
ggtctacctgagaagactcacaacttaacattacttgatggtgagatgataattgacact
gttccagatacacagaagcaggagagaagatacttgatctatgatctgatggccattaat
gggacgtctgtcgtagagcggcccttctacgaaaggtggaagatgcttgagaaagaagtg
atcgaacctcgaaatttggaacgccagcatataaatcatagtagaaattcttcctacaga
tatgacctggagccattcagggtgaggagaaaggatttttggttgctatctactgttaac
aagcttctaaatgaatttatcccaaggctttcacatgaagcagatggtcttatctttcag
ggctgggatgatccttatgttccccgtacccatgagggcctcctgaaatggaaataccct
gaaatgaactcagttgattttctctttgagctggaagacgaagatagacaactactttat
cttcatgaacggggaaataggaagctcatggaagggaatctggttgtgtttaaaggtgac
ttagatccttctgcattttcagggaagattatagagtgttcgtgggattctgaggaagag
gtctgggtatgtatgcgcatcagggcagacaaatcaacaccaaatgagttcaatacctac
aagaaggtgatgcgaagcataagggataatatcacagaggatgtcttgttaaatgaaatt
ggtgagattgttcgtctacccatgtacgcagacaggataaggaatgatagcaaagcagcc
caaatgcaccaccagcaccaaaattcagcgcgacgaaaatga
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