Telopea speciosissima (New South Wales waratah): 122662230
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Entry
122662230 CDS
T07910
Name
(RefSeq) KH domain-containing protein HEN4
KO
K21444
poly(rC)-binding protein 3/4
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122662230
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
122662230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_5
MOEP19
Secretin_N
Deltaretro_Tax
Motif
Other DBs
NCBI-GeneID:
122662230
NCBI-ProteinID:
XP_043713741
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All DBs
Position
5:44222485..44259373
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AA seq
725 aa
AA seq
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MEGSLVPKRHFDACTVDRLEPNGGGVASSTKRRHPSSSSTASSISFKPPPPPLKLSAGET
LFRILCPAVKTGGVIGKGGAIIRQFREQTGAKIRIDESVLGCDERVILIVAETMKKKKEN
NNVDGNSNNNGGGESDGEELGNSNNSNLGEEDASPAQLALVRVFERMMKVDEERLGVLGE
SEDGEEKEKEKEEKTANAGPTQSSVVCRLLAPSNQVGCVLGRGGKIVEKIRQNSGAQVRI
LPKDHIPACASPGDELIQITGIFSAVKKALLSVSSCLQDNPRTDAANTNSAKPLGAVLRG
TSMSTQVDQFSQRGYVSGLHAVDYHSRGSSVPGPENIVAGHRKVLEEEIMFRLLCQIDKV
GSLIGKGGCIIRALQGETGASIKIADAAPDSDERVVVISARESPEQKHSPAQDAVLRVHS
RIAEIGFEPGAAVVARLLVQSQQVGCLLGKGGTIVVEMRRATGASIRVFGKEQGPKCGGQ
TDDVVQVIGSLQSVQDALFHITSRLRETIFPMKPPVPSVGAAYFSAAMETPPAMFRSRHD
LSSPGHYPSTIVLSHALDRPPVSSQPMDRQPTLSHGMDHTGIANLERIPYPYSSERPVPG
PTYDRPSSPRSWPSQLISSGNPRGVVDTGTGLAPRNGLIGSGVQSAVMTSTTVEVVVPQT
LLSNIYGKNNSNLNKIRQISGAKVDVQDPRPGATEGVVVVSGTPDQTRAVQSLIQAFIFY
GQATP
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggagggctcactcgtccccaaacgccacttcgatgcttgcaccgtcgatcgattggaa
cccaatggcggcggcgttgcctcttccaccaagcgtcgccacccgtcttcatcctctacc
gcctcatctatctccttcaagccaccccctccacctctcaagctctcggccggcgaaacc
ctcttccggatcctctgccctgcagtgaagaccggtggagtcattggcaagggtggcgca
atcattcgccagttccgtgaacaaactggcgccaagattcgcatcgacgagtccgtcctt
ggatgtgatgagcgcgtcattctcatcgttgccgaaaccatgaaaaagaagaaagagaac
aacaatgtcgatggcaatagcaataacaatggtggtggagagagcgatggcgaggaattg
gggaattcaaataattcaaatttgggcgaagaagatgcgtcgcccgcccagttggcactg
gttagggtttttgagaggatgatgaaagtggatgaggaaaggttgggagttttaggggag
agcgaagatggagaggagaaggagaaggagaaggaagagaagacagcgaatgcagggccc
actcagagctcagtggtgtgtcggttgttagcgccaagtaatcaggtaggatgtgtgctt
ggaagagggggaaagattgtggagaagatcagacagaacagtggagctcaagttagaatc
cttcctaaagatcatatcccagcttgtgcttctcctggagatgagttgatccagataaca
gggatcttttcagctgtaaaaaaagcactattatcagtttcaagctgtctccaggacaac
cctaggacagatgctgccaacactaattctgctaaaccattaggggcagtgttgcgagga
accagcatgtctactcaggtagaccaattctctcagaggggttatgtatctggactccat
gctgtggattatcattccaggggttcttcagttccaggaccagaaaacattgttgccggc
cacaggaaggtactggaggaggaaatcatgtttcggttgttatgccaaattgacaaagtt
ggcagtttgataggtaaaggtggctgtattatacgggctttacaaggtgaaaccggggca
tcaatcaaaatagctgatgctgcacctgattccgatgagcgggttgttgtcatatctgca
cgagagtctccggaacaaaagcattctcctgcacaggatgctgtacttcgtgtccattct
agaattgctgagattggatttgagccaggtgcggcagttgttgctaggcttcttgtacag
tcccagcaggttggttgtttattaggcaaaggagggaccattgtggtcgaaatgagaaga
gcaactggtgctagcatacgtgtttttggaaaggaacaaggtccaaaatgtggcggacaa
actgatgatgtcgtgcaggttattggtagcctacagtctgttcaggatgctttatttcat
attacgagcaggcttcgggaaaccatcttccctatgaaacctccggttccaagtgttggt
gcagcatacttttctgctgcaatggagacacctcccgcaatgttcagatctagacatgac
ctatcctcaccgggacattacccttctacaattgtactctctcatgctctagaccgtcct
cctgtttcttcccaaccgatggatcgtcaacctaccctatcacatggtatggatcatact
ggtatagccaatttagaacgaattccttacccttacagcagtgaaaggccagtacctggt
cccacttatgataggccatcttctccaaggtcatggccttctcagttaataagcagtggg
aaccctaggggtgttgtggatactgggacaggtttggctccgagaaatgggcttattgga
agtggagttcaatcagcagttatgaccagcacgactgttgaggtcgtagttcctcagaca
ttgttgagcaacatttatgggaagaataatagtaacttgaataaaatcagacagatatca
ggtgctaaggtggatgtccaagatcccaggcctggtgctactgaaggagttgtagttgta
tctgggacacctgatcagactcgtgcagtccagagccttatccaagctttcatcttttat
ggacaggccactccttga
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