Telopea speciosissima (New South Wales waratah): 122662333
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Entry
122662333 CDS
T07910
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tss03400
]
122662333
Enzymes [BR:
tss01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
122662333
DNA repair and recombination proteins [BR:
tss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
122662333
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
122662333
NCBI-ProteinID:
XP_043713867
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Position
5:complement(14549451..14584414)
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AA seq
662 aa
AA seq
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MKIVTYNVNGLRPRISQYGSLLKLLNSLEADIICFQETKVARQDMTTDLITAEGYESFFS
CTRTSDKGRVGYSGVATFCRVNSAFSSNEVALPLSAEEGFTGLLENFQRGIGIKEDEMPA
KVESLQGMTKGDLLKLDSEGRCIITDHGHFILFNIYGPRAQCDDAERLQFKRTFFNMLQK
RWESLLTQGKRIFVVGDLNIAPEPIDRCNAGPDFAQNEFRRWLRSMLVEQGGPFFDVFRV
KHPERKEAYTCWSQCTGAEEFNYGSRIDHILIAGSCLHQDHSLESHNLIDCHVNECDIMT
QFKRWKSENMPRWKGGRNTKLEGSDHAPVYISFREIPNLLEHNTPSLSARYVPGVHGFQQ
TIVSLLMKRQISAELKKDGTSQLFSDENIIVESCSASAKRSLDSEEKFSDFNPQCEGSNP
SMKKQLSGFANEGSENSMFLLRNKTTSGQRLDSKKKVRHSGCSQRTLSSFFQKQSSHGAD
VVTESTDTSLSQVDVSERKTNSPCLTKVTNLPRESQEVKESDSPKKIQEIKETDSPKETP
EVKETDSPTGTQEGDESNGCKMFEVSMIPFTQSQGDENASGSSEKEKNDAALLEWRRIQQ
FMQNSVPLCKGHKEPCVARVVKKAGPNLGRRFYVCARAEGPPSNLEARCDYFKWANSKSG
KK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtgacatacaacgtgaacggcctaaggccgcgcatctctcaatacggctct
cttctcaaactactcaactcacttgaagctgacattatctgctttcaggagacaaaagta
gctagacaggacatgacaacagatttgattacggctgagggatatgaatcattcttttct
tgcacccgtacttctgacaagggacgcgtaggctactccggtgttgcaacattttgccgt
gtaaattcagcattttcgagcaatgaagtcgctttaccactttcagcagaagaaggtttc
actggtcttcttgaaaattttcaaagagggatcggcattaaagaggatgaaatgcctgca
aaagtggagagcctacaagggatgacaaaaggggaccttctgaaacttgacagtgaggga
cgttgtatcataacagatcatggccattttattcttttcaatatatatggccctcgtgct
cagtgtgatgatgcagaaagacttcagtttaagcgcacatttttcaatatgttacagaaa
agatgggagtctctcttaacacagggaaaaaggatctttgttgttggggatcttaacatt
gctcctgaaccaatagatcgctgtaacgcaggcccagattttgcgcaaaacgagtttcgg
agatggcttagatctatgctagtggaacaaggaggccctttttttgatgttttcagagtt
aagcatcctgagcgaaaagaagcatacacgtgctggtcgcagtgtactggagctgaagaa
tttaattacgggtctaggattgaccatatcctcattgctggatcgtgcttgcatcaagat
cacagtttggaaagccataacttaatcgattgccatgttaatgaatgtgacataatgacc
cagtttaagcgttggaagtctgagaatatgcccaggtggaaaggagggagaaacacgaaa
ttggaaggttctgatcatgctcctgtttacatcagttttagggaaatacccaatcttctg
gagcacaacactccatctttatctgctagatatgttcccggggtccatgggttccagcaa
actattgtctcattgctcatgaaaagacaaatatctgctgaactcaagaaggatggaaca
tcacaattattctcagatgaaaacattatagtggaaagttgctctgcaagtgcaaaaaga
tcattagattcagaggaaaaattttctgacttcaaccctcaatgtgaaggttccaaccca
agcatgaagaaacagttgagtggttttgctaatgagggttcagagaatagtatgtttttg
ttgagaaacaaaactacatctggccagcgtctagattccaagaaaaaagtgagacatagt
ggttgttctcaacgcactttaagttcttttttccagaaacagtcttcccatggtgctgat
gttgttaccgaaagcactgacacttcgcttagtcaagttgatgtctcagaaaggaagact
aattctccttgtttaaccaaagtgacaaatttacccagagaatctcaggaggtcaaagag
tcagattcccccaaaaaaattcaggagatcaaggagacggattctcccaaagaaactccg
gaggtcaaagagacagattcccccacaggaactcaggagggtgatgaaagcaatggttgc
aagatgtttgaggtcagcatgattccgttcacacaatctcaaggtgatgaaaatgcctct
ggttcttccgaaaaagagaaaaatgatgctgctttgttggagtggcgaagaattcaacag
ttcatgcagaacagcgtacctctgtgcaagggccataaggaaccatgtgttgctcgggta
gtgaagaaagcaggtccaaacttgggtcgtaggttttatgtctgtgctcgggctgaggga
cctccatcaaatctagaagcgcgctgtgattatttcaagtgggccaattcaaaatctggg
aagaaatga
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