Telopea speciosissima (New South Wales waratah): 122662597
Help
Entry
122662597 CDS
T07910
Name
(RefSeq) single-strand DNA endonuclease 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tss03400
]
122662597
DNA repair and recombination proteins [BR:
tss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122662597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
Chromo_2
XPG_I_2
Topoisom_bac
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
122662597
NCBI-ProteinID:
XP_043714214
LinkDB
All DBs
Position
1:complement(77318605..77334428)
Genome browser
AA seq
553 aa
AA seq
DB search
MGVKNLWDILDSCKKKLPLHHLQNKRVCVDLSCWMVQLQNVNKSYVATRDKFYLISLFHR
LRALIALNCSLIFVTDGSIPSIKLSTYKRRLGSVTEVSSVETNSQNASSLRRNMGSEFSC
MIKEAKVLGMALGIPCLDGLEEAEAQCALLNSESLCDGCFTTDSDVFLFGARTVYRDICV
GEGGYVVCYEMADIEKKLGFGRNSLIALALLLGSDYSPGVRGFGPETACEVVKSIGDGVI
LQRITSEGLAFAKKKEPKKQGQILNGNANKENNQFHKLNINESEQNPQDKQCIQVINAYL
KPRCHSADSEAVHRLLFQHPFQRNELQQMCAEYFGWAPEKTDEYILPKIAERNLRRFTYL
RKTSSEVGLQLPVYELPVTCPISAIIKRRKVQGTECFEVAWEEMDGLKTSTVPADLIESA
CPEKINEFEVRKAEEKKPKRNARSKKSESSAAMCEVNQRLQDLLLDIEAQSNVISSVTLH
HPVDPISAEAEVVNLLSPAPDVSVSKVLKNQQVSGRHIDVLDLSESETEASPEHARKARE
LRLFIASIKDDVS
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgaagaacctgtgggatatcttggattcgtgcaaaaagaaactcccccttcac
catctccagaacaagcgggtctgtgttgatctctcctgttggatggttcaacttcaaaat
gtcaataaatcttatgtcgctacaagggacaagttttatctcatttctctctttcaccgg
ctcagagcccttattgccttgaattgtagcctgattttcgttacagatggatcgattcct
tccatcaagctatctacttataaacgacgattgggatcagttactgaggtttctagcgtg
gagacaaattcacaaaatgcatcttcgcttcgtagaaatatgggatctgagttttcatgt
atgataaaagaggcaaaagtccttggcatggcacttgggatcccgtgtttggatgggctt
gaagaagctgaagcacagtgtgcattattgaactcagaatcattatgtgatggatgtttc
acgacggattcagatgtcttcctttttggtgcaaggacggtatatagagatatttgcgtg
ggggaaggtggttatgtagtctgttatgaaatggcagacattgagaagaaacttgggttt
ggaaggaactcattgattgctctggctcttctccttggtagtgactactctccgggagtc
cgcggttttggtccggagacagcatgcgaggttgttaaatcaattggggatggtgtcatt
cttcaacgtattacatcagaggggttggcatttgcaaagaagaaagaacctaagaagcag
ggtcaaattctcaatggcaatgcaaacaaagagaacaatcagtttcataaactgaatatt
aatgaaagtgagcaaaatccacaagacaaacagtgcatacaagtaatcaatgcatacttg
aagccaagatgtcactctgcagactcagaagctgtgcataggttgctttttcaacatcca
tttcaacggaacgaacttcaacagatgtgtgctgagtattttggttgggcacctgagaaa
acagatgagtacatcctcccaaagattgctgagagaaatttacggcggtttacttacctg
cgtaaaacttcatcagaagtaggacttcagctaccagtgtatgagttgccagttacgtgt
cctatttctgcaattatcaagcgcagaaaagtgcagggtacagaatgttttgaggttgct
tgggaagaaatggatggactgaaaacttccacagtccctgctgatctcattgaaagtgcc
tgtcccgagaagataaacgaatttgaagttaggaaagctgaagagaagaaaccgaaacgg
aatgcaaggtcaaagaagtcggaaagcagtgctgctatgtgtgaagtcaatcagaggctg
caggatctgttgcttgacatagaagcacaaagcaatgtgattagtagtgtaacccttcac
cacccagttgatcctataagtgctgaagctgaggtcgttaatctcttgagccctgctcca
gatgtttctgtttctaaagttttgaaaaatcaacaggtcagcggtcgacatattgatgta
ctcgacttaagtgagtctgagaccgaagcatcacctgaacatgctaggaaagcaagagag
ttgagattatttatagccagtattaaggatgatgtctcttga
DBGET
integrated database retrieval system
