Telopea speciosissima (New South Wales waratah): 122662615
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Entry
122662615 CDS
T07910
Name
(RefSeq) coatomer subunit alpha-1
KO
K05236
coatomer subunit alpha
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122662615
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tss04147
]
122662615
Membrane trafficking [BR:
tss04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
122662615
Exosome [BR:
tss04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122662615
Exosomal proteins of bladder cancer cells
122662615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_RFWD3
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Aa-Ago_N
Zn_ribbon_19
ENTH
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
122662615
NCBI-ProteinID:
XP_043714233
LinkDB
All DBs
Position
5:655461..660645
Genome browser
AA seq
1219 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHTKRPWILASLHSGVIQLWDYRMGTLIDKFDEHDGPVRGVHFH
TSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHNEYPWIVSSSDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQLKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHARQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFSLSGDSLYYVKDRFLRYYEFSTQKDIQVIPIRRPG
STSLNQGPRTMSYSPTENVVLICSDVDGGSYELYVVPKDSVGRGDTVQEARRGVGGSAVF
VARNRFAVLDKSNNQVLVKNLKNEVVKKSVLPIAADAIFYAGTGNLLCRADDRVVIFDLQ
QRIVLGDLQTPFVKYVVWSNDMESVALLSKHSIIIASKKLVHRCTLHETIRVKSGAWDDN
GVFLYTTLNHIKYCLPNGDSGIIKTLDVPIYITKVSGNTIYCLDRDGKNRAITIDATEYI
FKLSLLRKRYDQVMSMIRNSQLCGQAMIAYLQRKGFPEVALHFVKDERTRFNLALESGNI
QIAVASAKEIDEKDHWYRLGVEALRQGNASIVEYAYQRTKNFERLSFLYLITGNLDKLSK
MLRIAEIKNDVMGQFHNALYLGDIRERVKILENAGHLPLAYVTAAVHGLQDVTERLAAEL
GDNVPTLPEGKVPSLLMPPSPVLCGGDWPLLRVMKGIFEGGLDNVGRSAQEEDDETADAD
WGEDLDIVDVDGMQNGDVGIADEDGEVAHEENDEEGGWDLEDLELPPEVDSPQTATSARS
MVFVAPTPGMSVSQIWTQRSSLAGEQAAAGNFDTAMRLLSRQLGIKNFAPLKPLFIDLHT
GSHSYLRIFPPAPVNPLALERGWSESGSPNVRGPPALVYNFSQLEEKLKAGYKATTSAKF
TEALRLFLSVLHTIPLIVVESRREVDEVKELIIIAKEYVLGLKMELKRREIRDNPVRLLE
LAAYFTHCNLQMPHLRLALLNAMTVCYKAGNLSTAANFARRLLETNPTIESQAKTARQVL
QAAEKNMKDVSQLNYDFRNPFVVCGATHVPIYRGQKDVSCPYCSSRFVPAQEGQLCTVCD
LAVVGADASGLLCSPSQIR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgctgactaaattcgagaccaagagtaatcgggtgaagggcctgagttttcatactaag
aggccatggatacttgcgagtcttcacagtggtgtgatccagctttgggattacaggatg
gggactcttatcgacaaattcgacgagcatgatgggcccgttcgtggtgtccatttccat
acatctcagccgctgttcgtctccggaggagatgattacaagatcaaagtgtggaattac
aagatgcacagatgtctgtttactcttcttgggcatttggattacattcgtactgttcaa
tttcacaatgagtacccatggattgttagttcaagtgatgatcagactatcagaatatgg
aactggcaatctcgtacttgtatatctgtcttaactggccacaaccattatgtcatgtgt
gcctccttccatcctaaagaagatctcgttgtctctgcctccttggatcagacagttcgt
gtttgggatattggtgctttgaggaagaagacagtgtcccctgcagatgacatcctgcgg
ctgagtcagatgaacacagatttgtttggtggtgttgatgctgttgtcaagtatgtcttg
gaagggcatgatcggggagtcaactgggcttcgttccatcctaccctgcctttgattgtg
tctggagcagatgaccgccaattgaaactctggcgcatgaatgatacgaaagcttgggaa
gtagacacattgagaggacacatgaataatgtgtcatgtgtgatgtttcatgctaggcag
gacattattgtttccaattcagaggacaaaagtattcgtgtgtgggatgtgacaaagagg
actggtgttcagacattccgaagggagcatgatcggttctggatccttgcggctcatccg
gaaatgaaccttctggcagctggtcatgatagtggtatgatagttttcaagttagaaaga
gaaagacctgctttttccttgagtggtgattctctgtactacgttaaagaccgtttcctt
cggtattatgagttttcaactcagaaggacattcaagtgatcccaattcgacgccctggt
tcaaccagcctgaaccaaggacctaggacaatgtcgtatagccctacggaaaatgttgtc
ttgatctgctcagatgttgatgggggttcctatgaactttatgttgtacccaaagacagt
gttggcaggggtgatactgtgcaagaagcgagaagaggagttggaggatcagctgttttt
gtggctcggaacaggtttgctgttcttgacaaaagcaacaatcaagtgttggtgaagaac
cttaaaaatgaggttgtgaagaagagtgtacttcctattgctgccgatgcaatattctat
gctggaacaggcaatttgctttgcagggcggacgatagagtggtcatctttgatctccaa
cagagaattgttcttggtgatctccagaccccttttgttaaatatgttgtttggtcaaat
gacatggagagtgttgcattgttgagcaaacattcaataatcattgcaagtaagaaactt
gtgcaccgttgcacccttcatgagacaatccgtgtgaaaagtggagcttgggatgacaac
ggtgtcttcctatatacaacactgaatcatatcaagtattgccttcctaacggtgacagt
ggaattatcaaaacccttgatgttccaatatacattacaaaggtttctggtaataccatt
tattgcttggatcgggatggaaagaatcgtgcaataactatagatgcaactgagtacata
tttaagctctcactcttaaggaaaagatatgatcaggttatgagcatgattaggaactca
cagctgtgtgggcaggccatgattgcgtatctgcaacggaaaggtttcccagaagttgcc
ctccattttgtgaaagatgagaggacacggttcaatctggctctggagagtggaaatatc
cagattgctgttgcttctgccaaggaaatcgatgagaaagatcattggtataggttgggg
gttgaggcacttcgtcagggtaatgcaagcattgtggaatatgcttaccagaggacaaaa
aactttgagaggctatccttcctgtatctgataacagggaatttggataagctgtctaaa
atgctgaggattgctgaaatcaagaacgatgtgatgggtcaattccacaatgccctttat
ctgggtgacatcagggagcgtgtcaagatcttggagaatgctggccatttgcctctcgct
tatgttacggcggctgttcatggtctccaggatgttactgagcggcttgctgctgagctg
ggggataatgttcctactttgccagagggtaaagtaccatcccttctgatgcccccttca
cctgttctttgtggtggagattggccattgttgagagttatgaaaggcatttttgagggt
ggattagacaatgtaggcaggagtgcccaagaggaagatgatgagactgctgatgctgat
tggggtgaggatttggatattgttgacgtggatggcatgcagaatggagacgttggcata
gcggatgaggatggggaagtagcacatgaagaaaatgatgaggaaggaggatgggacctt
gaggatctggaactgccacctgaagttgatagccctcaaactgccactagtgcccgttct
atggtgtttgttgcgccaactcctggcatgtcagttagtcagatttggacccagagatcg
tctcttgctggtgaacaagcagcagctgggaattttgatactgccatgcgcttgctaagc
cggcaactgggtataaagaactttgctcctttgaagccactgtttattgatctacacaca
ggtagccatagctacctacgtattttccctccagctcctgtgaatccactggcgcttgag
agaggatggagtgagtcaggtagccccaatgtgaggggcccaccagcccttgtttacaat
ttctctcagttggaagagaagcttaaagcaggttacaaggccacaacaagtgcgaagttt
acagaggctttgaggcttttccttagtgtacttcataccattcctttgattgtggttgaa
tcaaggagggaagttgatgaagttaaggagttgataatcatagcaaaagagtatgtgctg
ggcttgaaaatggagctcaagaggagggaaataagagacaatccagtaagactgctggag
cttgcagcctacttcacccactgcaacctgcagatgccacacttgagactggcattgttg
aatgccatgactgtttgctacaaggcagggaaccttagcacagccgctaactttgcaagg
cggctgttagagaccaaccctaccattgagagccaagcaaagacagcgagacaagtcctc
caggctgcagaaaagaacatgaaagatgtgagccagctcaactatgacttcagaaaccca
tttgtggtttgtggggcgactcatgtaccaatctaccgtggtcagaaggatgtgtcatgc
ccatattgcagctctaggtttgtgccagctcaggaaggacagctctgtaccgtatgtgat
cttgcagtggttggagcagatgcatctggtctgctttgttcaccttctcagataagatga
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integrated database retrieval system
