Telopea speciosissima (New South Wales waratah): 122663193
Help
Entry
122663193 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122663193
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122663193
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
122663193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-RING_5
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
Prok-RING_1
Prok-RING_4
zf-Nse
Arc
RH_dom
zinc_ribbon_16
UNC-79
Rtf2
zf-RING-like
zf-RING_4
RINGv
SLX1_C
zf-P11
PHD_NSD
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
122663193
NCBI-ProteinID:
XP_043714830
LinkDB
All DBs
Position
5:61671396..61672625
Genome browser
AA seq
409 aa
AA seq
DB search
MRNELKQNQSHRSILDLFHLNPATQNERLICIYLFLMFRFLPYSAAQSSNQPSPVVLYNN
GYPFNPSVVIIIIVIVSAFLTLFFISVCLHRCYRIENDGNTPLNDVEGRISRRDYRGLNP
ALMENLPTFAYSHVKDHKLGNGALECVVCLTEFEDEDKIRLLPTCDHVFHAECIDAWLSK
RTTCPVCRANLVPLPAETPATIVPVHDIEGDDSDGEIPISEPVEVENEQVSVDVINEEPQ
VGVTVAMSPEVINQTPMQNRTIRSMKPRYAGRFPRSHSTGHSLVQPGEDVERFTLRLPED
VRKQIMKMRQLKRTRSMEALPGLQSPRKGYRVTDESSSRGGKSIGEKPEGWVFSRTPPFI
MKAFSPRSPKMIAEGDVPVTPPRPKPFRSPLRVCKKADGTELSLIRSPV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacgaattgaagcagaaccagagtcaccgttcgatccttgacttgtttcacctt
aatccagcaacccaaaatgaacgactcatctgcatctatttgttcctcatgttccgtttt
cttccttactccgctgcacagagtagtaatcaaccgtcacctgtcgttctctataacaac
ggctaccctttcaacccatcggtagtaatcataatcatcgttatcgtaagcgccttctta
actttgttcttcatctccgtctgcctccaccggtgctaccggattgaaaacgatggaaac
actcctcttaatgacgtggaaggccgaatatcacgtagagactatcgaggactcaacccg
gccctgatggagaatttaccaacctttgcttactcacatgtgaaggatcacaaattggga
aatggagctctggaatgcgtggtttgcttgaccgagttcgaagatgaagataagattcga
ttgcttccaacgtgtgatcatgtcttccatgccgaatgcattgatgcttggttatctaaa
cgcacaacctgcccagtctgccgagctaatctcgttcctttaccggccgaaactcccgca
actattgtaccggtacatgacatagaaggtgatgattcggatggggaaatcccgatatcg
gaaccagtggaggtagagaacgagcaagtttcggttgatgtaataaacgaagaaccacag
gttggggtgacagtggcaatgtcaccggaggtaattaatcagacaccaatgcagaaccgg
acaattagatcgatgaaaccgagatacgcggggagattcccacggtcgcattcgacgggt
cactcgctggtccaaccgggagaagatgtcgagcggttcacccttcggcttccggaagac
gtgaggaagcaaatcatgaagatgaggcagttgaaacgtactaggagtatggaggcgtta
ccagggttacagagtccgaggaagggttaccgggtgaccgatgaaagcagtagcagagga
gggaaatcgataggggagaaaccggaagggtgggttttctcgaggacaccacctttcatc
atgaaagccttttctcctcggtcgccgaagatgatagcagaaggagatgtcccggtgact
cctcctcgtcctaaaccttttaggtcgcctttgcgagtgtgcaagaaagctgatggaact
gaactgtcgttgattcgctctccggtttga
DBGET
integrated database retrieval system
