Telopea speciosissima (New South Wales waratah): 122663196
Help
Entry
122663196 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122663196
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122663196
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
122663196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
Prok-RING_1
zf-Nse
Prok-RING_4
zf-RING-like
DUF678
PHD
RH_dom
zf-RING_4
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
122663196
NCBI-ProteinID:
XP_043714834
LinkDB
All DBs
Position
5:61741395..61742435
Genome browser
AA seq
346 aa
AA seq
DB search
MRNELMQNVLISVYLFLMFRSLPYAVAQSSSQPPPVVLYGLNNNLTFSVHIGLVLLFCFF
ILLLFISLGIYKCSRIQSNRSIGGNGVEGRISRRGNRGLDPAVIETFPIFAYSHVKDHKL
GNGALECAVCLNEFVDEDTIRLLPKCDHVFHPDCIDVWLSNRTTCPVCRSNLVPVSDETP
ETMVPVQDIEGDDSDGEIPTSEPVEAENVQVSVNVVSEEPQVVTVAMSPDVINQTPMQNR
PARSTKLSYAGRFPRSNTTGHSLVQPGENVERFTLRLPDDVRKQIMNMRQVNRTKSMVAF
PVQVSPGKGSRSTGEGSSRGRKSMGEKREGRVFSMTLPCSGNCSSS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacgaattgatgcagaatgtactcatctccgtctatttgttcctcatgttccgg
tcgctaccatacgccgttgcacagagcagtagtcaaccgccacccgtcgttctttatggc
ttaaacaacaatttgaccttttcggtgcacatcggactcgtcctcttgttttgcttcttt
attttattgttattcatctccctcggcatctacaagtgctccaggatccaaagcaatcga
agcattggcggtaatggcgtggaaggtcgaatatcacgtaggggaaatcgagggctcgac
ccggccgtgatcgagacttttccaatcttcgcttactcacatgtgaaggaccacaaattg
ggaaatggagctttggagtgcgccgtatgcttgaacgagttcgtagatgaagatacgatt
cgattgctgcccaagtgtgatcatgtcttccatcctgattgcattgatgtttggttatct
aatcgcacaacctgccctgtctgccgatctaacctcgttcctgtatcggacgaaacacct
gaaactatggtaccggtacaggacatagaaggcgatgattcggatggggaaatcccaaca
tcggaaccagtggaggcagagaacgtgcaagtttccgttaatgtagtaagcgaagaacca
caggtggtgacagtggcaatgtcaccagacgtaattaatcagactccaatgcagaaccgg
ccagcgagatcgacgaagctgagttacgcggggagatttccgcggtcgaatacaacggga
cactcgctggttcaaccgggagaaaacgtcgagcggttcaccctgcgccttccggacgat
gtgaggaagcaaatcatgaacatgaggcaggtgaaccggactaagagcatggtggcgttc
ccagtgcaagtaagtcctgggaagggttcccggtcgaccggtgaaggtagtagcagagga
cggaaatcgatgggagagaaaagggaaggccgggtcttctcgatgacattgccttgctcc
ggtaactgctcttcatcctaa
DBGET
integrated database retrieval system
