Telopea speciosissima (New South Wales waratah): 122663197
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Entry
122663197 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122663197
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122663197
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
122663197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
zf-Nse
Prok-RING_1
RINGv
PHD_NSD
Baculo_RING
PHD
DUF1272
SLX1_C
zf-RING-like
Arc
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
122663197
NCBI-ProteinID:
XP_043714835
LinkDB
All DBs
Position
5:61750628..61751593
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AA seq
321 aa
AA seq
DB search
MTNELMQKHSNCSILGLFGHSLAGQNIVICIYLFLMFRSLPYAVSQSSSQPPAVVPYGIT
NTYSPSSAINNLTLHFFMFSAIFFLSFISLCVCKCSRTESDRSIRGNIVEGRISRKGNRG
LDPALIQTFPIFAYSHVKDHKLGNGALECAVCLNEFEDEDPIRLLPKCDHVFHPECIDAW
LSKRTTCPVCRGNLVPVPGETSETMVVPVQDIEGGSDGEIPTSEPLDAENEQVSINVLSE
EPQVMAVAPEVINQTPMQNRPARSTEPRYAGRFSRSHSTGHSLVQPGEDVERFTLRLPED
VRKQIMNMRQVNRTKSMVVCG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgaattgatgcagaagcatagtaactgttcgatccttggcctgtttgggcat
agtctagcaggccaaaatatagtcatctgcatctacttgtttctcatgttccggtcgcta
ccatacgccgtttcacagagcagtagtcaaccgccagccgtcgttccctatggcataacc
aacacttacagcccttcgtcggcgatcaacaatttgaccctacacttcttcatgtttagc
gccatttttttcttgtccttcatctccctctgcgtctgcaagtgctcccggaccgaaagc
gatcgaagcattcgcggtaatatcgtggaaggccgaatatcacgtaagggaaatcgaggg
ctcgatccggccttgatccagactttcccaatcttcgcctattcacatgtgaaggaccac
aaattgggaaatggagctctggaatgcgccgtatgcttgaacgaattcgaagacgaagat
cctattcgattgctgccaaagtgtgatcatgtcttccatcctgagtgcattgatgcttgg
ttatctaagcgcacaacatgcccagtctgccgaggtaacctcgtccctgtaccgggcgaa
acatctgaaactatggtggtaccggtacaggacatagaaggcggatcggatggggaaatc
ccaacatcggaaccattggacgcagagaacgagcaagtttccattaatgtactaagcgaa
gaaccacaggtgatggcagtggcaccagaggtaattaatcagaccccaatgcagaaccgg
ccagcgagatcgacggagccgagatacgcggggagattttcacggtcgcattcaacgggg
cactcactggttcaaccgggagaagatgtcgagcggttcaccctccggcttccggaagac
gttaggaagcaaatcatgaacatgaggcaggtgaatcggactaagagcatggtggtatgc
ggataa
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integrated database retrieval system
