KEGG   Telopea speciosissima (New South Wales waratah): 122663418
Entry
122663418         CDS       T07910                                 
Name
(RefSeq) splicing factor U2af large subunit B-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122663418
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tss03041]
    122663418
Spliceosome [BR:tss03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122663418
 Complex B
    122663418
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 122663418
NCBI-ProteinID: XP_043715033
LinkDB
Position
5:9267936..9294090
AA seq 570 aa
MPDYRGRYDGNGEGLNDYSSSPQQKTSSHGGADDYSDSKSRHGSRDYERESSRSRDKERE
KGRDKDRERDTEKDRDRERDRDRDRDRQHRDHFRERSDRRDRGRDRDDDDDHHRIRDYER
RRDYDRDREGRNQHRSESRSRGRSHHRSRSGSPSRSRSRSKSKRISGFDMAPPTTALMPG
AAAAAAAAAAAAGQLTGATPTIPGMFPNMLQFPGQLATPLFMHPQAMTQQATRHARRVYV
GGLPPSANEQSVATFFSQVMAAIGGNSAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAM
ALDGIIFEGAPVKVRRPSDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFV
GGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGI
KMGDKTLTVRRANQGASQPKPEQESILLQAQQQVALQRLVFQGGALPTKVISLTEVVSPD
ELKDDEEYEDIMEDMRTEGGKYGNLVNVVIPRPGPNGELSPGVGKVFLEYTDTDGATKAR
QGLNGRRFGGNLVTANFYAEDKFSQGDYDG
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgccggattacaggggaagatacgacggtaatggcgaagggctcaacgattacagttcg
tcaccccaacagaagactagcagtcacggcggtgcggacgattatagtgactcgaagtct
cggcatggttcacgtgattatgagagagagtcttcaagaagtagggacaaggaaagagaa
aaagggagggataaggacagggaaagggacacagaaaaggacagggacagggaaagggat
cgagacagagaccgtgatcgtcagcacagagaccactttagggaacggagtgacagaagg
gaccgtggtcgagatagagatgacgatgatgatcatcaccgaatccgagactatgagagg
cgtagagactacgatcgagatcgagaaggccggaatcagcatagatctgaatctcgctca
aggggtagatctcatcatagatcaagatctggttctccatctcgatcccggtcaagatca
aagagcaaacggattagtggttttgacatggcacctccaacaactgcattgatgcctgga
gctgctgccgccgccgctgccgccgccgctgctgcaggtcaattgactggggccactcca
accattcctggaatgtttccgaacatgttacagtttcctggacagctggcaaccccactt
tttatgcatcctcaggcaatgactcagcaggcaacgagacatgctcggcgggtttatgtt
ggtggccttcctccttctgcaaatgaacagtcagtggcaactttcttcagccaggttatg
gctgcaattggaggaaactctgccggaccaggagatgctgttgttaatgtatacatcaac
catgagaagaagtttgcatttgttgagatgaggtctgttgaggaggctagtaatgcaatg
gccttggatggtattatttttgagggcgccccagtgaaggtgaggaggccaagtgattac
aacccttctcttgctgcagcacttgggccaagtcaacccaatcccaatctcaacctagct
gccgttggattaacaccaggttctgctggtggactcgagggtcctgatcgcatctttgtg
ggtggtcttccatactatttcacggaagcacagatacgggaacttcttgaatcatttgga
cctcttcgaggttttgatcttgtcaaggacagggaaacagggaactcaaaaggctatgct
ttttgtgtgtatcaagatctgtcagtgactgacattgcttgcgcagctctcaatggaata
aagatgggtgataaaactctaactgttagacgcgcaaaccagggggcttcgcagcccaaa
cctgagcaggagagtatactattgcaggcgcagcaacaggtagcattgcagagacttgtt
tttcaaggtggtgcactacctaccaaggttataagcttaacagaggtagttagtccagat
gaactgaaggatgatgaggaatatgaagacataatggaggacatgagaacagaaggagga
aaatatgggaatctggtgaatgtagtcattccacgtccaggaccaaatggcgagttatct
ccaggtgttgggaaggtgttcttggagtatactgatacagatggagccacaaaagccagg
caagggttgaatggaaggagatttggcgggaatttagtcaccgccaacttttatgcagag
gacaagttctcccagggagactatgatggatag

DBGET integrated database retrieval system