Telopea speciosissima (New South Wales waratah): 122663624
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Entry
122663624 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like isoform X1
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122663624
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122663624
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
122663624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
Tmpp129
Cadherin_C_2
MRAP
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
122663624
NCBI-ProteinID:
XP_043715160
LinkDB
All DBs
Position
6:complement(54402546..54403815)
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AA seq
380 aa
AA seq
DB search
MRRKLDLLPQPPPPPVSAAIGGGIGETNGVGSSSMTSSPTKGNLNPSLLIISLILMAVFF
FSVLLHLLLRYLSRSSSTTTTVSSGDHNVASADHSHHAPRISSRRVSPEYQSLIDSLPLF
SFDSVTGLKSSSTVDCAVCLSKLEPHDKLRLLPLCCHAFHAQCIDTWLASSHTCPLCRST
ICVNESEELAKLSSLSASGGDSFRLEIGSISRRNSAAADSGSVPNSRRSYSIGSFEYVVE
DDSEVMVAGSIHRQGGSDNNLGRKDINGVASPAAVNVAGPEPPGDHVAAEVASGGRSWLK
DYVDRLASSASTSFSSRTQSFRYSGRIFTGSSRRSDLYTGSGRRSGDNAVAGFGEVGSWD
LEGNWVSEEMGGFFRWLSGV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaaagctggatctcttacctcagccgccgccgccgccagtgtcagcggcgatt
ggaggtggaattggagagactaatggtgttggtagttcttctatgacgtcgtcgccgacg
aaagggaatctgaaccctagccttctcatcatctctctcatactcatggcagtgtttttt
ttctccgtcttactccacctcctcctccgctacctcagccgttcttcctccaccaccacc
accgtatcatccggcgatcacaacgtggcctctgcagatcactcgcatcacgctccccgc
atctccagccgccgcgtgtctcctgaatatcaatccttgattgattcactcccacttttc
tctttcgattcagtcactggtctgaaaagctcatctactgttgattgtgctgtttgttta
tccaaactcgaacctcacgataagctccgtttgcttccactctgctgtcacgccttccac
gctcagtgcatcgacacgtggcttgcttctagccacacttgtcctctctgccgatcaaca
atctgcgtgaacgaatccgaggaactggcaaagctctcgtctctgtctgcttccggcgga
gatagtttccgattagagattggaagtatcagtcgccggaatagtgccgccgcagattct
ggtagtgtacctaactctcgtaggtcttattctattggatcatttgagtacgtggtggaa
gacgattctgaagtgatggtggcggggtccattcacaggcaaggaggttctgacaataat
cttgggcggaaggatataaacggtgtggcttctccggctgcggtgaatgtggctgggccg
gagcctccaggagatcatgtagcggcggaggttgctagtggtgggaggtcgtggttgaag
gattatgtggataggttggcttcatcggcttcgacgtcgttttcatctcggactcaatcg
tttcgatattcaggtaggattttcaccggcagtagtcgccggagcgatttgtatacaggg
agtggtcgtcggagcggtgataatgccgttgccggttttggggaagtcgggagttgggat
ttggagggaaattgggtgagcgaagaaatggggggcttctttcggtggctgtcaggggta
tga
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