Telopea speciosissima (New South Wales waratah): 122663717
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Entry
122663717 CDS
T07910
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1A-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04120
Ubiquitin mediated proteolysis
tss04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122663717
04120 Ubiquitin mediated proteolysis
122663717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122663717
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122663717
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122663717
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-RING_Vps41
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
122663717
NCBI-ProteinID:
XP_043715283
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All DBs
Position
6:complement(7741139..7770279)
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AA seq
374 aa
AA seq
DB search
MMRLQTYAGLSLVGALAIIYHAFNTRGQFYPAMAYLSTSKISLVLLLNMGLVIMCILWQL
TKKVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA
QKRVEYIETTPSVPMLSHIRIVSFLGFLLLLDSLFLYSSLKYLIQTWQSSVSLFFAFEYM
ILATTTVSTFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG
VPLHLIRELYETFRNFKVRVSDYIRYRKITSNMNDRFPDATPEELNAGDVTCIICREEMV
TAKKLLCGHFFHVHCLRSWLERQHTCPTCRALVVPPENGTTASGGQHGVRSEVHQQGKTF
GSWLFSFIFHVYNL
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctgcaaacatacgcgggactgagtttagttggtgcactagcgattatttat
catgcttttaataccagaggccaattttacccagcaatggcgtatttatcgacctccaag
atcagtctggttcttctcctgaacatgggtctggtcatcatgtgcatcttgtggcagtta
actaaaaaggtgttccttggttcactccgggaagcggaggttgagaggctgaatgaacag
tcttggagggaggttatggaaatcctctttgctatcacaatctttcgacaggatttttct
gttacttttcttgcaatggtcactgctctcctgttgattaaggctttgcactggttggct
caaaagagggttgagtacattgagacaaccccatcggttcccatgctttctcacattcgg
atcgtttcttttttggggtttcttctccttctggatagtctcttcctgtacagttcctta
aagtatttgatacagacatggcaatcttctgtttcactcttctttgcgtttgagtacatg
atactagcaacaacaacggtgtctacatttgtgaaatatgttttctatgtcagtgacatg
ttgatggaaggacaatgggagagaaaggctgtctatacgttctacttggaacttattcgt
gacttgcttcacttgtctatgtatctgtgcttcttccttgtgattttcatgaactatggt
gtgccattgcacttaattcgagaactctatgagaccttccgcaacttcaaggttcgagtt
tctgattatattcgatatcgtaaaatcacttcaaatatgaatgaccgtttcccagatgcg
acacctgaagagctgaatgcaggtgatgtgacatgcattatttgtcgtgaggagatggtg
acagcaaaaaagctcctttgtggacacttttttcatgtgcattgcctccggtcatggtta
gagcggcaacatacttgccctacatgcagagcacttgttgttcctcctgaaaatgggaca
actgcatctggggggcaacatggagtcaggtctgaagttcatcagcaaggtaaaactttt
ggctcttggctgttttcatttatttttcatgtttataacttgtaa
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