Telopea speciosissima (New South Wales waratah): 122664110
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Entry
122664110 CDS
T07910
Name
(RefSeq) uncharacterized protein LOC122664110
KO
K24155
rabconnectin-3a
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122664110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122664110
Membrane trafficking [BR:
tss04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122664110
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
122664110
RAVE complex
122664110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_EML_2
Beta-prop_IFT140_1st
WD40_CDC20-Fz
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
122664110
NCBI-ProteinID:
XP_043715744
LinkDB
All DBs
Position
6:66948338..66978236
Genome browser
AA seq
2582 aa
AA seq
DB search
MAERSRSRSSSSRTHSTATNKSSEEEEEKINDVNISDLLPLELMKSEIIPQIPNCSDSAV
DWLPDFAGFSWIAYGASSLLVISHFPSPLSKEESLIGPIFRQVIELSSDESVLVKAVAWS
PSFPSEGELAAVVENCVCLYSGNSRITHGSFCWSHVGILLHSSTVDTIKWTGSGDGIIAV
GVDVALWKRNSQSWEIVWKFRTEQPQTLVSTTWSIEGPAAIAASLGVSDNGDSSSLPDGA
SKCVVVFQNDVKHGSLRAELHHPQPVSMIQWRPLIRTQSKKDILHSEKDVLLTCCLDGTV
RLWSEIDSGRAKKSGKDANDQKHIRRSFHVTAVIEINQSMNGTLGRDIFVTWAVEFRGLI
NTGGAKQCLSTGKENNQPGRCEWLIGFGPGISVSFWAIHCLDDISPLRFPRVTLWKRELL
VGTEVNHLHGTGDSNTKNLPLFTKAITMRSQLFGPPVICSLIQLLPCNSMSWLQLYTPSS
NDMEDGSLKQSGKENCLSCSACGVLSLDGHSGRISQIALHPYSCEHELLVSLDSNGFLLF
WSLYTDSSYSLGMPMVGHNSWKLLGKTLVPNFSSLDYKSLRWAPSVLNQHRVLLMGHSKG
IDCFIIKISESEQEKILCHRLCTVPFFGHSCSDAPTNIFAIPVPSDSGQTFMFDNFMLIG
VWMKEFQALSWKVTLHSKDISESICECSFDTKNGAWVHENAFAGKRYYVVAVPCSSMFPD
PHNLDQVTTVAVVCPGTLMPYVQQNWSSPDGLCRKYAAYHMATGCLDGSLKLWRSGPAIS
SPPHLAKSPSPWELVGMFCVHPGPINALSLSNCGRKIATISKAGHLDNVSTLHIWDSICL
IGGGNFLVEDKISLDGAVIALNWLALGNGQLLLGVCMQNELRVYAQRRCGRHMVKSEKSL
DMHIWFCLASARTNPAIQDFLWGPRTTPILLHERYFCHFSQWSFHMDEEYRARCYKKYAE
DDPHLCRNGEDTRMLSAIFTDFNSCNVEELSIDERGERWNSILPGLKSAKIDSLFNNYFL
SMAQQQYSLTPKIGWWNMLEVAEKLGGSLPIYNPEALLFNMYAGKWKRAYIAIQHLVKYL
KSDNASVTCQNGSLIIPQIHLSKYFEELFSTSLGDKGLQWGGDASMFSSSAQFETSSTQF
GGYNSTVNGTNNMFTFSSAKSEVNSFIETLEKTNDFVAMSNSERMQMLALIDLLGEVSGS
CSSAYDSLDEPGRRFWVALRFQQFYFLRRSGRSACAEDLVVDSELMGWAFHSDCRENLFR
SFLSNEPSWKEMRNLGVGFWFTNSAELRTRMEKLARLQYLKKKDPKDCTLLYIALNRLQV
LTGLFKISRDEKDKPMVAFLSRNFQEEKNKAAALKNAYVLLGKHQLDLAIAFFLLGGEPS
SAVTICAKTLGDEQLALVLCRLLEGYGGPLECHLVSKVLLPAAIEKQDYWLSSLLEWTLG
NYPQSFLSLLSFETDLAFKKPALLSNNAVFLDPSVGQYCLMLTSKHRMRNSVGESVVAML
ARWATWMTATALNRCGLPLEALEWLSSSPSTLEDKDQGSVDFGNLDILHGLLKSSTSDAS
NWLSGDVAFNLESHAKLDLAIQYLSGLIMEHPVWQDICLRSNQALARTKEYETHQFKLLH
ESFQLKLNTGLAIFEQKYALNSLDLIETMLVFSCNHGLPFLGYQILHDYNSQGLQQDEFN
NFLSLCIIPTLILKAVIQVCYLVARNIVAWSILCRQLTPSSTKSDGYGGIAWNSYVTRPM
RSLSATLQFYCAGFLRDDFTIKIFTVLDLFEYYSCFSSAWSLRNLKDLILMVQPILIMDT
NKKYAPSEADITNLKKVMYQSAELTTHSLLSDDVGGLPHATQTQGQHEDGENFWSSIPEE
ERWPFLGACLWRFQTKFAKVLLQPVFDVLKDGQLYNISLSRLSSLAFSPRTSLSDGNVTV
KQINMVTVVMAELLKSSLSCVSSSHEKHLASFLRQKVEDGLPMPTLVWLEKSRSQPRPLG
GHPGWRTYNLHTINDTNWRISFEILWEISTDPKEIWKDFAQENVSWLQFISQKSSRSWSN
IHKETIGDCENADTSSYDQVEWHSNSSNGAGSPAQYRSLDGHSFLGPGWKASTITREAIC
FEHPKEIYKKNGELLEAICINSIDQRQTALASNRKGIAFFKWKDEEPFKDQSDYIWSEAD
WPQDGWAGSESTPMPTFVSPGVGLGSKKGSHLGLGGATIGLRRPLAKPGKEMTGGAAFGI
PGYAGIGASGLGWGVQEDFEEFVDLPATVENISTRALSSHPTRPLFLVGSSNTHVYLWEF
CKDRATATYGVLPAANVPPPYALASISALQFDHCGQRFATAASDGTVCTWQLEVGGRSNV
RPTEAALCFNSHALDVSYVAGSGSIIAAAGCSSNGVNVVIWDTLAPSTTSQASLICHEGG
ARSLSVFDHDIGSGSISPLIVTGGKGGDVGVHDFRFIATGRTKRNRHSNASEQNTKSSLT
HDRQSGTSNKFGEQNLNGMLWYIPKAHQGSVTSISTIPNTSLFLTGSKDGDVKLWDVKRA
ELVFHWPKLHEKHTFLQPSSRGFGGVVRAAVTDIQVLSDGFLTCGGDGTVKLVQLKDFHQ
RT
NT seq
7749 nt
NT seq
+upstream
nt +downstream
nt
atggcagagagaagcagaagcagaagcagcagcagcagaactcacagtactgccaccaat
aaatctagcgaagaagaagaagagaagattaacgatgtaaatatttccgatctattgcca
ctggaactcatgaaatcagagataattcctcaaataccgaattgctcagattcggccgtt
gattggttaccagactttgctggtttctcatggatcgcatacggtgcttcttcgcttctc
gtgatctcccacttcccttcgccgctctctaaggaagaaagcctaattggtcccattttc
cggcaagtgatcgagctatcgtctgacgagtctgtgttggtaaaggctgttgcttggtct
ccgtccttcccttcggaaggtgagctggcggcagtggtggagaattgtgtctgcttgtat
tcagggaattctcgaattactcatggttctttttgttggagtcatgttggaatacttcta
cactcgtctacggtggacaccatcaaatggactggctctggggatggtataattgcagtg
ggagttgatgtagcattgtggaaaaggaatagccagagctgggaaatagtatggaaattt
agaacagaacagcctcaaactctggtttctacaacctggtcaattgaagggcctgcagcg
attgcagcatctttgggtgtatcagacaatggagattcatcttctctacctgatggtgca
agtaaatgtgtagttgtttttcagaatgatgtgaagcatggatctctgagagctgagtta
caccatcctcagcctgtttcaatgattcagtggaggccattaattagaacacagtcaaag
aaggatatattgcattccgaaaaagatgttctgctaacatgctgcttagatggaactgta
cggctgtggagtgagattgatagtggaagagctaaaaaatccggtaaggacgccaatgat
cagaagcacattaggcgatcatttcatgttactgctgtaattgaaataaaccagtcaatg
aatggaaccttgggcagagatatatttgtgacatgggcagtagaattcaggggtttgatt
aatacaggtggagcaaaacaatgtctatcaacaggaaaagagaataatcagcctggcagg
tgtgagtggttaattgggtttgggcctggaatatcagttagtttctgggctattcactgc
cttgatgacatttcaccattaaggttcccacgagtgactctatggaagagagagttgtta
gtgggtacggaagtaaatcatcttcatggtactggtgactcaaatactaaaaacctacca
cttttcactaaagccattacaatgaggagtcaactctttggtccaccggtcatatgctct
ttgattcagttattgccttgtaattccatgagctggttacaattatacactccgtcatca
aatgatatggaagatggatctttaaaacagtctggaaaggagaactgcttatcatgttct
gcttgtggagttttaagtctagatggtcatagtggaagaatctcacaaattgcactacat
ccttatagttgcgaacatgaacttcttgtttctttggattctaatggtttccttcttttc
tggtcactttataccgattccagttacagtttgggcatgccaatggtgggtcataattca
tggaaactattaggcaaaactttagtcccaaatttttcatctttggattataagagcctg
agatgggcgccgtcagttttgaatcagcaccgagttcttcttatgggacattctaaagga
attgattgcttcattattaaaatttctgaaagtgaacaagaaaaaatattatgtcatagg
ttatgcacagtccctttctttggtcatagctgtagtgatgcacccaccaacatctttgca
atccctgtgccttcagactctgggcaaaccttcatgtttgacaattttatgttgatagga
gtatggatgaaggaatttcaagctttatcatggaaagttaccttacactctaaggatata
tctgaaagcatctgtgaatgtagttttgacaccaaaaatggcgcatgggtacatgaaaat
gcttttgctgggaaaaggtattatgttgttgctgttccttgctcatcaatgtttccagat
cctcacaaccttgaccaagttacaaccgtggctgtggtctgtccaggtacactgatgcca
tatgtacaacaaaattggagttctcctgatggtttgtgcaggaaatatgctgcataccac
atggctacaggctgtttggatggaagtctaaaactatggagaagtggtcctgcaatatca
tcacctccacatcttgcgaagtctccctcaccctgggagcttgtggggatgttttgcgtg
catcctggtccaattaatgcattgtcgctttccaattgtggtaggaagattgcaaccatc
agcaaggcaggccatttagataatgtaagcactcttcatatatgggattccatatgcctc
ataggtggtggaaactttttagtggaagataagatatccttggatggggctgtcattgct
ctaaattggttagccttgggaaatggtcaattactgcttggcgtttgcatgcaaaatgag
ttgcgggtatatgctcaaagacgttgtggtcgtcatatggtaaagtctgaaaaatcattg
gacatgcatatttggttttgtcttgcatctgctcgtactaatccagctattcaagacttc
ctttgggggcccaggacaacacctattcttcttcatgagagatacttttgtcacttcagt
cagtggtcattccatatggatgaggaatatcgagctaggtgctataaaaaatatgctgaa
gatgatcctcatctttgcaggaatggagaagatacaaggatgctttctgcaatttttact
gacttcaatagttgtaatgttgaagaattatccattgatgagaggggtgaaagatggaat
tccattttgcctgggttgaagagtgcaaaaattgattctctgttcaacaattactttcta
tcaatggctcaacaacaatatagtttaacacccaaaattggttggtggaacatgctagaa
gttgcagagaaattgggtggatctttgcctatttataatcctgaggcactccttttcaat
atgtatgcagggaagtggaaacgtgcatatattgccatacagcacctagtgaaatatctt
aaatctgataatgcttctgttacctgtcagaatggtagtcttatcattccccagatacat
ttgtcaaagtattttgaagaacttttctccacaagtttgggtgataaaggattacaatgg
ggtggagatgcttcaatgttctcatcttctgcacaatttgagacaagctcaactcagttt
ggtggatataattcaactgtcaatggtaccaataatatgtttactttctcctcagcaaaa
tctgaagtcaatagctttatcgaaactttggagaaaaccaatgactttgtggctatgagt
aatagtgagaggatgcaaatgctcgcacttatagatcttttgggtgaagtcagtggttca
tgttcttcagcttatgacagccttgatgaacctggtcgaaggttttgggttgcattgagg
tttcagcaattttattttctccgaagatctggaagatctgcatgtgcagaagatttggtt
gttgactccgagctgatgggatgggccttccactctgattgtcgagaaaatctctttagg
tcttttctctcaaatgaaccctcatggaaggaaatgcggaatttgggtgtgggattttgg
tttactaattcagcagaactgcgtacaaggatggagaagcttgcaagattacaatattta
aagaagaaagatccaaaggattgtactcttttatatatagcattgaatagacttcaagtt
ttgactggtctttttaagatcagcagagatgaaaaggacaagcctatggttgcatttttg
tcacgcaattttcaggaggagaaaaacaaggcagctgctttaaaaaatgcttatgtctta
ttgggaaaacatcagctggatcttgctattgctttctttctacttggaggtgaaccttct
tctgcggtcactatctgtgccaaaactctaggggatgagcagcttgctcttgttctttgt
cggcttcttgagggttacggcggaccgttagagtgtcatcttgtatcaaaggttctgctt
cctgctgctattgagaaacaggactattggctttcaagtcttcttgagtggacattaggg
aattatcctcaatcatttctgagcttgcttagtttcgaaactgatttggcatttaagaag
cctgctctcctatccaacaatgctgtttttttagacccgagtgttggtcagtactgccta
atgctgacatccaaacatagaatgaggaattctgtaggagagagtgttgttgcaatgctg
gcaaggtgggcaacctggatgactgctactgcattgaacagatgcggccttccgcttgaa
gctttggagtggctttcatcttctcctagcactcttgaggataaagatcaaggcagtgta
gattttgggaaccttgacattctacacggactactaaagtcatccaccagtgatgcctct
aactggctgtcaggtgatgtggcttttaatttggagtcacatgctaaattggatttagca
atccagtacctttcagggctgataatggagcatcctgtttggcaagacatctgtttaaga
tctaatcaagcacttgcccgcaccaaagagtatgagactcatcaattcaagttgttacat
gaaagttttcaacttaagttaaacacaggacttgcaatttttgaacagaagtatgctttg
aatagtcttgatctgattgagacgatgctagtattttcatgcaatcatgggttgccattt
cttggataccaaatattacacgactataattctcaaggacttcaacaagatgaatttaac
aattttctttcattatgtatcattcctacactcattctgaaggctgtcatacaggtctgc
tatttagttgctcggaatattgtggcctggagcattctttgccgtcaattgacaccaagc
tctacaaaaagtgatggatatggtggcatagcttggaattcgtatgttacacgaccaatg
agaagcttaagtgccactctgcaattttattgtgctggctttctgagagatgatttcaca
ataaaaatctttactgttcttgatctttttgaatattattcatgtttttcttctgcttgg
tctttaaggaatttgaaagatctcattctgatggtacaacccattttgattatggatacc
aacaagaagtacgcaccctcagaagcagacatcacgaatttgaagaaagttatgtaccaa
tctgcagagttgacaacccatagtttgttaagtgatgatgtggggggccttccccatgct
acacaaacgcaagggcaacatgaagatggtgaaaacttttggtcttcaataccagaagaa
gaaagatggccattcttaggggcttgcctctggcgattccaaaccaagtttgccaaagtt
ctgctacagccagtttttgatgtccttaaagatggtcaattatataatatttctctcagc
agactttcctccttggcatttagtcctagaacttctttgtctgatggcaatgttaccgtg
aaacagatcaatatggtcacagtagttatggcggagttattgaagagctcactttcatgt
gtttcttcttctcatgaaaaacatctagcatcatttttgaggcaaaaagtagaggatggg
ttacctatgcctactcttgtttggttagaaaaatctaggtctcaaccaagacctctgggt
ggtcatccgggttggagaacttataacttgcacacaattaatgatacaaactggaggata
tcatttgaaatcttatgggaaatttctactgatccaaaggaaatatggaaagattttgcg
caggaaaatgtaagctggctgcaatttattagccagaagtcctctagaagctggagtaat
atacataaagaaaccataggtgactgcgaaaatgctgacacctcaagttatgatcaagtg
gaatggcatagcaactcttctaatggggctggatcaccagctcagtatcgatctcttgat
ggccatagtttccttggtcctggatggaaagcatctaccattaccagggaagctatatgt
tttgagcatccaaaagaaatatataagaaaaacggagagcttctagaggctatatgtatc
aattccattgatcaacggcaaacagcgcttgctagcaatagaaaggggatagctttcttt
aagtggaaagacgaagaaccttttaaagatcagtcagattacatctggtcagaggctgat
tggccgcaagatgggtgggctggttctgaatctactccaatgcccacatttgtttctcca
ggtgtcggtcttggtagcaagaaagggtcacaccttggattgggtggagcaacaattgga
ctaagaaggcctttggcaaaaccagggaaagaaatgacaggtggggctgcatttggaatc
ccaggttatgctggtattggtgcttctggcttaggttggggtgtacaagaggattttgag
gaatttgttgatctacctgcaacagttgaaaatataagcacaagggctttgtccagtcac
ccaacacggcctttgttcttggttggatctagtaatacccatgtttatctttgggagttt
tgtaaggacagagctactgcaacctatggtgtgttgcctgctgcaaatgtgcctccacca
tatgcacttgcatcaatatcagcattgcagtttgatcactgtggacagagatttgctact
gctgcatcagatggaaccgtatgcacatggcaacttgaagttggaggaaggagcaatgtc
cgcccaacagaagcagccctttgctttaacagtcatgcattggatgttagttatgtggca
gggagtggatccataattgctgcagctgggtgtagctctaatggtgttaatgtagttata
tgggataccttggctccttcaaccacatctcaagcttctctcatatgtcatgaaggtggt
gctcgttccctatctgtgtttgatcatgacataggaagtggttctatttctccccttatt
gtcactggaggaaaaggtggtgatgttggggttcatgacttccgtttcattgctactggg
aggacaaagcgaaacaggcattctaatgcctctgaacagaataccaagtcttctcttaca
catgacagacaatcaggaacttcaaacaaatttggggaacaaaacctgaatgggatgctt
tggtatataccaaaggctcaccaagggagtgttacaagtatatctaccatccccaataca
agtttattcttaacggggagtaaagatggggatgtaaaactttgggatgtcaaaagagct
gagcttgtattccattggccaaaattacatgagaaacacacttttctgcaaccaagctcc
aggggctttggtggagttgttcgggctgcagtcacagatatccaagtcctttctgatggt
tttcttacatgtggtggagatggaactgtaaagctagtccagctcaaagatttccaccaa
agaacctga
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integrated database retrieval system
