Telopea speciosissima (New South Wales waratah): 122664116
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Entry
122664116 CDS
T07910
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122664116
Transcription machinery [BR:
tss03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
122664116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
GerE
Motif
Other DBs
NCBI-GeneID:
122664116
NCBI-ProteinID:
XP_043715755
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Position
6:complement(66279596..66284162)
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AA seq
516 aa
AA seq
DB search
MGVVTVSSSASRTTLGLSASFSTHRTQSNRPLFLAFKTDKTKNTALVAPQESIPIPIDTP
GKQQKRRRRSNKPPKRVKAVSTDEASLCTIDLDYNEAAAKLENIYKLTAPASVSDVEDID
HVVRRHRQTRKKLGEGDKKDGKESNSYVVRNTKKKEKRLSLDKRITLRRKKEEELVPLSQ
AKKDTKDKIGDVEKLVREYSISTDFVSLDWKKMKIPPVLPSSEHACLFKFMQPMKALLQL
KESIHGDLGRESTDAELAEATNMTVAKMRRCIEVGQAARSKLIKHNLRLVLFVINKYFQE
IADGPKFQDLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTMSSFTRVPFG
LESIRLEIQRAKLELLFEHERLPTDEEVIKKVGISPERYYEVMKASKPIYSLHARHVTTQ
EEFINRITDIDGVGGDKRRQPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI
AGNLNISREMVRKHEVKALMKLKHPARMDYLRRYIY
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttccagttcagcttctcgcacaacactaggcctgagcgcaagt
ttctcaacccacaggacgcaatcaaatagaccattgttcttggccttcaaaactgataaa
acaaagaacacagctttggttgcaccacaggaatccatcccaattcccattgacactccg
ggaaagcaacagaagagacgaagaagaagcaacaagcctccaaagagagtaaaagctgtg
tctactgacgaagcttctctttgtaccatagacttggattacaatgaagccgcggccaaa
cttgaaaatatatacaagcttaccgcccctgccagtgtttctgatgtagaagatattgat
catgtggttcggaggcatcgtcaaacaaggaagaagctgggagaaggtgataagaaagat
ggcaaggaatcaaatagttatgtggtgaggaacactaaaaagaaggagaagcggttgagt
cttgataagaggatcacattgagaagaaagaaggaggaagagttagttcctttgagccag
gcaaagaaagatactaaggacaagattggagatgttgagaaacttgttagggagtattct
atctccactgatttcgtaagcttggattggaagaagatgaagataccaccagttcttcct
tcttctgagcatgcttgtctgttcaagtttatgcaacctatgaaggcactccttcaattg
aaggagagcatccatggagatttgggaagagaatctactgatgctgaattagctgaggca
acgaatatgactgtagctaaaatgagaagatgcattgaagtcggtcaagcagcccgaagc
aagctcatcaagcacaatctgcgcctcgttctatttgtaattaacaagtactttcaagag
atagccgatgggccgaaatttcaagacctctgtcaagcaggagtgaagggtctcatcact
gccattgatcgctttgaaccgaaaaggaggtttagattatccacatatgcactgttctgg
atcaggcatgctatcatccgttccatgaccatgtcaagcttcacacgtgttccttttgga
cttgaatcgattcgactagagattcaacgggccaaactagaattgttgtttgagcacgag
aggcttccaacagatgaagaggtaataaagaaagtaggaatctcacctgagcgatattat
gaagtcatgaaggcttcaaaacccatctactctctccatgcaaggcatgttaccacacaa
gaagagttcatcaatcgcattactgatattgatggggtgggaggtgataaacggaggcaa
cctgctcttctcaggcttgctattgatgatgtgcttgattctctcaagcccaaggagagc
ttggtgatcaggcagagatatggtcttgatgggaaaggtgataggacactgggagagata
gcagggaacctgaatatttcaagagagatggtccggaagcatgaagtaaaagctcttatg
aagctgaagcacccagctcgaatggactatcttcgcagatatatttactga
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